|
Name : lin0956 (lin0956) Accession : NP_470293.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0363 EC number : - Position : 981817 - 982521 bp Length : 705 bp Strand : + Note : similar to glucosamine-6-Phoasphate isomerase (EC 5.3.1.10) DNA sequence : ATGCAACTTATCACAACAGAAAATAAATTAGCAGGTTCTAAAAAAGCACTAGAAATTATTGAAAAAGGCATTACATCAGG TGAAGTAAATACACTTGGTCTAGCAACAGGAAGCACTCCAGAAACACTTTACGCTGAGCTTGTAAAAAGCGACGTTGACA CAAAAAATGTAACAACAACTAACCTAGATGAATATGTAGGTCTTGCAGCAGACGACCCAAACAGTTATCATTACTATATG AATGACTTATTATTCTCTAAAAAAGCATTTAAAGAAAGTTTCTTACCAAACGGGGAAGCGACTGACGCTGAAGCAGAATG CGCACGTTATGAAGGAATTTTATCTGAGCATCCAATCGATATTCAAGTGCTTGGAATTGGAACAAACGGCCACATCGGTT TTAATGAACCAGGAACTTCTTTTGATTCATTAACACATAAAGTTGTTTTAACAGATTCCACTCGTGAAGCTAACAAACGC TTTTTTGAAAGAGAAGAAGATGTTCCAACACATGCTTATTCTATGGGAATTAAATCAATCATGAATGCGAAGAAAATTAT CCTACTTGCTTTTGGTGAAAACAAAGCACAAGCAATCAAAGAAACTATTAAAGGACCTGTAGATGTGAATTGTCCTGCTT CTGTTCTTCAAAATCATCCAGATGTTACTGTGATTCTTGACAACGAGGCGGCGTCACTTCTATAA Protein sequence : MQLITTENKLAGSKKALEIIEKGITSGEVNTLGLATGSTPETLYAELVKSDVDTKNVTTTNLDEYVGLAADDPNSYHYYM NDLLFSKKAFKESFLPNGEATDAEAECARYEGILSEHPIDIQVLGIGTNGHIGFNEPGTSFDSLTHKVVLTDSTREANKR FFEREEDVPTHAYSMGIKSIMNAKKIILLAFGENKAQAIKETIKGPVDVNCPASVLQNHPDVTVILDNEAASLL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nagB | YP_001800906.1 | glucosamine-6-phosphate isomerase | Not tested | Not named | Protein | 2e-30 | 45 |
