|
Name : lin0924 (lin0924) Accession : NP_470263.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1131 EC number : - Position : 954564 - 955286 bp Length : 723 bp Strand : + Note : similar to ABC transporter, ATP-binding protein DNA sequence : ATGGCAGAAATAGCAATTGATGTTTCGAATTTAGATGTAAAAATCGGCAAGAAACCAATTTTATCAGATATGTCTCTCGA AATAGAGAAGGGCGAAATATTCGGCTTAATCGGTCCGTCTGGCGCTGGTAAAACAACTCTTGTTAAAACAATCATCGGTA TGGAAAAAGCAACAAGTGGCCAAACCAAAGTATTAGGAAATGTAATGCCGAACTTGCCGGTAATTAGCAAAATCGGTTAT ATGGCTCAATCAGATGCACTGTATACTGATTTAACAGCCAAAGAGAACCTAGATTTTTTTGCTTCACTTTATTCTATTAA GGGCGCTGCTAAAAAAGACCGAATCAACTATGCGACGAACCTGGTTAATTTACAAACCGATTTAACAAAAAAAGTGAATA ATTTTTCAGGTGGAATGAAACGCAGGTTGTCTCTCGCTATTTCTGTCCTTGCAGATCCTGATGTTTTAATATTAGATGAG CCAACAGTCGGAATTGATCCAGAACTAAGAAAAACCATTTGGGAAGAACTGGACGATCTTAAAGCAAACGGCAAATGTAT CCTTGTGACGACGCACGTGATGGATGAAGCCGAAAAATGCGATAGACTTGCAATGATAAGAAATGGAAAAATAATCGCCA TAGGGACCCCACAAGAGCTCTCAAGTAAAACTTCATCTGGCAAACTAGAAGATGCCTTTTTAGAGTTTGGAGGGAAGGAC TAA Protein sequence : MAEIAIDVSNLDVKIGKKPILSDMSLEIEKGEIFGLIGPSGAGKTTLVKTIIGMEKATSGQTKVLGNVMPNLPVISKIGY MAQSDALYTDLTAKENLDFFASLYSIKGAAKKDRINYATNLVNLQTDLTKKVNNFSGGMKRRLSLAISVLADPDVLILDE PTVGIDPELRKTIWEELDDLKANGKCILVTTHVMDEAEKCDRLAMIRNGKIIAIGTPQELSSKTSSGKLEDAFLEFGGKD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0081 | YP_251996.1 | hypothetical protein | Not tested | SCCmec | Protein | 2e-46 | 54 |
| SH2613 | YP_254528.1 | hypothetical protein | Not tested | ¥ðSh2 | Protein | 7e-58 | 53 |
| SE0094 | NP_763649.1 | ABC transporter ecsA-like protein | Not tested | SCCpbp4 | Protein | 1e-56 | 51 |
