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Name : lin0644 (lin0644) Accession : NP_469987.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Resistance Product : hypothetical protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 672812 - 674689 bp Length : 1878 bp Strand : + Note : similar to heavy metal-transporting ATPase DNA sequence : ATGAAAGAATGGATGGAGCGGAATTGGCAATTTGTAACGACTGGTATTAGTGGGGTTTTAATTGTTGTCGGTAGTCTAAT CGGGAATGATGTCGGTGATTTTTGGACAGCGGTGATTTTCTTGAGTGCCTTTGTTATTGGCGGATTTGAACAAGCTAAGG AAGGGATAGCGGCGACGATTAAAACGAAAAAACTTAATGTAGAGCTTTTAATGATATTAGCGGCTACAGGGGCTTCAATT ATTGGTTATTGGTTTGAAGGCGCCATACTTATTTTTATTTTCTCAGTTAGTGGGGCATTAGAAACGTATACGACGAATAA AAGTAAGCGCGAAATCACGAAATTAATGGCTTTTCAACCGGAACGAGCTTTTCGTTTTCTTCCAAATGGTGATGTTGAAG AAGTAGCTGCAAAAGATTTGCAATTAGATGATAAAGTACTCGTTCGACCTGGAGAAAGTGTTCCAATTGATGGTGTGATT GTTCGTGGTTCAACAACTTTGAATGAAGCAGCAATCAATGGTGAATCGGTTCCAGTTGAGAAAACTGTTGGTGCTGAAGT GTTTGGTGGGACAGTTAATGTCAGCAGTGCTATCACCATTAAAGTAACGCAAACTTTTGATAATACGATTTTTAGCAAGA TTATTCGCTTAGTAGAAACCGCCCAGAGTGAACCTTCAAAAACCGCTCGTTTTATTGAGCGATTTGAGGATGCGTATGTT AAAGCAGTATTATTATTTGTTTTAGTGATGATGTTTTTACCGCATTTTGCACTCGGTTGGTCTTGGAATGAAACTTTTTA TCGCGCGATGGTTTTACTTACTGTAGCTTCTCCATGTGCGCTAGTTGCTTCGGTGACTCCAGCGACTTTAGCAGCTATTT CTAATGGAGCACGTCACGGGATTTTATTCAAAGGCGGCGTACACTTGGAAAATTTGCGCGGTGTAAAAGCAATTGCATTT GATAAAACGGGAACTTTGACAAACGGAACACCTGAACTAACAGACCAAATATTTAAAGAACACATCGATAAACAGCAAGT AATAAATGTGGCGGCAGCAATGGAGCGGCAGTCTTTGCACCCATTAGCCGCAGCAATCACCAAAGCATTAGATATCGAAG TAACGGATAAATTAACAGAAATAGAAGTAACGGATGTGCCAGGTTGGGGAGTGCAAACTAGCTACAAAGGCGAAACTTGG CAAGTCGGTAAAGCCGGTTATGTTGGGGCGGAAAATGCTGCCAAGTTTTCAAATGGCGCGTTTGAAAGGCTTGCTAGCGA AGGGAAAACGATTGTATATGTCGCTAAAGAAGGCGAAATCGTTGCGATGTTTGCGCTCAAAGACACTTGCCGACCTGAGG CGATTCGGACCATTCAAGCTCTAAAAGCAAAAGGTATTAAAACAATTATGGTAACAGGAGATAATGCACAAACTGGCGCT GCAATCCAAGCTGAACTTGGTATGGATAGGGTTGTTTCTGGATGTTTGCCTGAGAAAAAAGTAGATGTTTTAAAAGAACT ATCGCTGACTTATGGAAGCGTGGCAATGGTTGGTGACGGGATCAATGATGCTCCAGCACTTGCCCATGCGGCTGTTGGCA TTGCGATGGGCGAGGGAACGGATATTGCAATGGAAACAGCAGATGTTGTTTTAATGAAAAATGACTTAGAGAAAATCCCG TATGCCTACACGCTATCCGAACGACTTCACTGGATTAGTTGGCAAAATATTTGTTTTGCAATTGCCGTGATTCTGCTCTT AATAACAGCGAACGTTTTTCAAGTAATCAATTTACCGTTCGGGGTTGTGGGACATGAAGGAAGCACGATTTTAGTAATTT TAAATGGACTTAGACTACTTAAGTCCAACCGGAAATAG Protein sequence : MKEWMERNWQFVTTGISGVLIVVGSLIGNDVGDFWTAVIFLSAFVIGGFEQAKEGIAATIKTKKLNVELLMILAATGASI IGYWFEGAILIFIFSVSGALETYTTNKSKREITKLMAFQPERAFRFLPNGDVEEVAAKDLQLDDKVLVRPGESVPIDGVI VRGSTTLNEAAINGESVPVEKTVGAEVFGGTVNVSSAITIKVTQTFDNTIFSKIIRLVETAQSEPSKTARFIERFEDAYV KAVLLFVLVMMFLPHFALGWSWNETFYRAMVLLTVASPCALVASVTPATLAAISNGARHGILFKGGVHLENLRGVKAIAF DKTGTLTNGTPELTDQIFKEHIDKQQVINVAAAMERQSLHPLAAAITKALDIEVTDKLTEIEVTDVPGWGVQTSYKGETW QVGKAGYVGAENAAKFSNGAFERLASEGKTIVYVAKEGEIVAMFALKDTCRPEAIRTIQALKAKGIKTIMVTGDNAQTGA AIQAELGMDRVVSGCLPEKKVDVLKELSLTYGSVAMVGDGINDAPALAHAAVGIAMGEGTDIAMETADVVLMKNDLEKIP YAYTLSERLHWISWQNICFAIAVILLLITANVFQVINLPFGVVGHEGSTILVILNGLRLLKSNRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | YP_005732869.1 | cadmium-translocating P-type ATPase | Not tested | Type-V SCCmec | Protein | 1e-105 | 43 |
| SE0062 | NP_763617.1 | copper-transporting ATPase copA | Not tested | SCCpbp4 | Protein | 1e-105 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lin0644 | NP_469987.1 | hypothetical protein | BAC0092 | Protein | 8e-116 | 46 |
