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Name : azi; div (lin0592) Accession : NP_469935.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecA Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 619800 - 622130 bp Length : 2331 bp Strand : + Note : similar to preprotein translocase SecA subunit; functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane inser DNA sequence : ATGAGACAGAATTATGATGATCGCAAAATTGTGAAACAGTATCGAGAAATAGCCCGTCAAATCGTTAGAAAAGAGGGCTT ATATAAAAATATGGACCAAGATGAACTTCGCGAACAAACGAATTTTTGGCGCGAAAAATTCAAGACAAAACCAATGACTG AACGAGATAAGATTAATATTTTTGCATTAGCAAGAGAAGCGGCAAGTAGAATTATTGGTTTGGATGCCGTGGTCGTTCAA TTAATTGGTGCGCTTGTTCTTGGTGATGGCAAAGTGGCAGAAATGAAAACCGGTGAAGGTAAAACATTGATGTCTTTATT TGTGATGTTTATCGAAGTGATGCGTGGCAACCGTGTTCACCTTGTTACTGCGAATGAATATTTAGCAAGACGGGACCGGG AAGAAATCGGACAAGTGTTAGAATATCTAGGTATTTCAGTTGCTTTAAACGAATCTGGTTTGGATAAAGATCAGAAAAAA GCGATTTATACAGCAGATGTCATTTATGGAACAGCTTCTGAATTTGGTTTTGATTATTTACGTGATAATATGGTCCGTCA AAAAGAAGATAAGGTACAAAGTGGACTTGATTTTGTTTTAATCGATGAGGCAGATTCCATTTTAATAGATGAAGCAAGGA CTCCTTTACTTATTTCTGATCGTAAAGAAGAAGATTTATCGCTTTATCAAACGGCAAATGAACTCGTGCAAACGATGATG AAAGATGATTATGAAATAGAAGAACATAAGCGTTTTGTCTGGTTGAATGATGCGGGGATTGAAAGAGCTCAAAAATTTTG GGGCGTTGAATCACTTTATTCCGCGGAAGCACAGGTGGAACTTCGAATTACAATGCTTCTAATGCGTGCTCATTTTTTGA TGCATAAAGATAAAGACTATGTCGTTCTTGATGGGGAAGTTTTAATTATCGACCCGCATACTGGTCGCGCGCTTCCAGGT CGTCGCTTTAATGATGGACTTCACCAAGCTATTGAAGCAAAAGAAGGCGTGGAAGTAAAAGAAGAATCGCGCACGCTTGC GACAATTACAATTCAAAACTATTTCCGAATGTATAAGAGACTCTCTGGTATGACAGGTACGGCGAAAACCGAAGAAGAAG AATTTCGGCAAATTTACAATATGGATGTTGTCGTAATACCAACAAATTTACGCGTCAATCGTGAAGATATGCCCGATGAC ATTTTTTATACGAAAAAGGAAAAAGGAAGAGCGATTGTTTATGAAGTTTCTTGGCGTTATGAAAAAGGTCAGCCAACACT AATCGGAACTTCTTCTATTAAAAGTAACGAGTGGATTAGTAGTCTGCTTGATGCTGCAGGAATTCCTCACCAAGTTTTAA ATGCTAAAAACCACGCCCAAGAAGCGGAAATTATTGCCAAAGCCGGGAAACGTGGCATGGTAACTTTAGCAACGAATATG GCTGGACGAGGAACGGATATAAAGTTAGATCCGGATGTTCATAAACTCGGTGGATTAGCAGTAATCGGGACAGAACGCCA CGAGAGTCGTCGTATTGATTTACAGTTAATGGGGCGTTCAGGTAGACGTGGTGACCCCGGTTTTAGTAAGTTTATGATTT CATTAGAAGATGATTTATTAGAGCAGTTTGAAAGTAAGAGTTGGGAAAAACTGTCTACGAAACTTAAGCGTAAAGCACCT CGTGATGGAAAACCTGTTAACTCGCGTAAAATTCACTCTGTCATTGTAGATGCTCAAAAACGTTTAGAAGGTGCAAATTA CGATATTCGGAAAGATTTGCTTTCTTACGATGAAGTAATCGATTTACAACGGAAAATGGTTTATAAAGAGCGCGATCAAC TGTTAGAACGAAATAAACTAGGTGTTTCTTCTGAAAAAATTCTTCGAGAAGTCGCGGAATATTCATTTATTCATCCACTT GAACTTGAGGAAGAAGAGCTGGAGAAATACTATAGTCGTCAAAAAGAATTACTTGGTGGCACTAAATTCCCAATTTCCTT CGATCAAGTGACATTAATGGACCCAGTTGAGGTTGTGGAAGAAATAGTTGCTTGGCATAAGAAAGAACGTAATAAATTCC CAGTTGAAACAATTACTGCAATTGAAAAAGAAGTGTATTTAAACTTGATGGACCAAATGTGGGTAATGCATCTTGACGCT ATGGTTCAATTACGGGAAGGAATTCATTTACGCGCATATGGACAGCAAGATCCGCTCGTTATGTATCAAAAAGAAGGTGC TCAATTATTTGAGAAATTCCAAGCTGACTATCATTTCTATTTTGCACATGCTTTACTTGAATTAGATCCAGATGGATTGA TTCAAGGATAA Protein sequence : MRQNYDDRKIVKQYREIARQIVRKEGLYKNMDQDELREQTNFWREKFKTKPMTERDKINIFALAREAASRIIGLDAVVVQ LIGALVLGDGKVAEMKTGEGKTLMSLFVMFIEVMRGNRVHLVTANEYLARRDREEIGQVLEYLGISVALNESGLDKDQKK AIYTADVIYGTASEFGFDYLRDNMVRQKEDKVQSGLDFVLIDEADSILIDEARTPLLISDRKEEDLSLYQTANELVQTMM KDDYEIEEHKRFVWLNDAGIERAQKFWGVESLYSAEAQVELRITMLLMRAHFLMHKDKDYVVLDGEVLIIDPHTGRALPG RRFNDGLHQAIEAKEGVEVKEESRTLATITIQNYFRMYKRLSGMTGTAKTEEEEFRQIYNMDVVVIPTNLRVNREDMPDD IFYTKKEKGRAIVYEVSWRYEKGQPTLIGTSSIKSNEWISSLLDAAGIPHQVLNAKNHAQEAEIIAKAGKRGMVTLATNM AGRGTDIKLDPDVHKLGGLAVIGTERHESRRIDLQLMGRSGRRGDPGFSKFMISLEDDLLEQFESKSWEKLSTKLKRKAP RDGKPVNSRKIHSVIVDAQKRLEGANYDIRKDLLSYDEVIDLQRKMVYKERDQLLERNKLGVSSEKILREVAEYSFIHPL ELEEEELEKYYSRQKELLGGTKFPISFDQVTLMDPVEVVEEIVAWHKKERNKFPVETITAIEKEVYLNLMDQMWVMHLDA MVQLREGIHLRAYGQQDPLVMYQKEGAQLFEKFQADYHFYFAHALLELDPDGLIQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 4e-105 | 42 |
