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Name : lin0360 (lin0360) Accession : NP_469705.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 374713 - 376710 bp Length : 1998 bp Strand : - Note : similar to transketolase DNA sequence : ATGAGCAGAATTGATGAACAAATGGTTAACTCGATTCGCGTATTATCAATGGATATGATTGAAAAAGCGAACTCCGGACA TCCCGGTTTGCCGATGGGAGCCGCACCAATGGCTTTCTCGCTTTGGAAAAATCATTTAAAATTCAATCCAGAACACCCAA CTTGGTTTAACCGCGATCGCTTCGTCTTGTCAGCTGGTCACGGTTCGGCAATGCTTTATAGTTTGCTACATCTATTTGGT TATGATTTACCAATGAGCGAGCTGAAAAACTTCCGCCAAACTGGCAGTAAAACGCCCGGTCATCCTGAATTTGGTCATAC GGTTGGTGTCGATGCAACTACCGGTCCTCTTGGTCAAGGTTTCGCAATGGGAGTTGGGATGGCAATGGCCGAGGCTCACC TTGGCGCCAAATTTAACCAACCTGAATTCCCGGTTGTTGATCACAATACCTATGTGCTATGCGGTGACGGCTGTTTGATG GAAGGTATTTCCTACGAAGCTGCCTCCCTTGCTGGTCATTTAAAACTGGGAAAATTAGTTGTTTTATATGATTCAAACGA TATTTCACTGGATGGCGATTTAAACGAGTCTTTTTCAGAAGACATCGAGCTTAGATTCCGAGCTGCTGGTTGGCAAACGC TACGTGTGGACGACGGAAACGACTTAGATGCGCTTGATGCAGCAATCCATCTTGCAAAAACCGAGAAATCCCGCCCAACT TTAATCGAAGTGAAAACGGTCATCGGTTATGGTAGCCCTGGAAAAGCCGGAAAATCAGCGGCACACGGCTCCCCACTTGG CGAAAAAGAACTCAAACTAGCAAAAGAAGCTTACGATTGGCAAATGCCACCTTTTGAATTACCAAAAACTGTCGAAAATC AGAAAGAATTTTATCATTCTAAAGGTCGCGCGAGTGAAAGCAGCTGGCTCCGGACATTCAATGCTTACAAACAAAAATAT CCAGCACTCGCAGAAAGTTTGCAACAATTAATGGATGATAATTTGAATCCAGATTGGGATGCAGAATTACCTGTCTTTGA TGAAAATGCGGACAAACCAGTTGCAACTCGTGAAGTATCAGGGATTGTCCTTCAAGAATTAGAGAAAAAACTGCCTAACT TATTTGGCGGTGCGGCTGATTTAGCTTCCTCCAACAAAACCAATTTAAAAGCTAGCGAACGGTTTGCTCCAGGTAACTAT GCCGCCAAGAATATTTCGTTCGGCGTCCGCGAATTTGCGATGGGAGCAGCAGTCAACGGCATGACGCTTCACGGCGGAGT TCAAGCATTCGGCGCGACCTTCTTCGTATTCTCGGATTATCTACGTTCCGCGATTCGTTCAGCAGCCTTAATGGGCATTC CATCCACCTTCATTATGACCCATGATTCCATCGCGGTCGGTGAAGACGGTCCAACACACGAACCAATCGAGCATCTCGCA TCCTTCCGCGCCATGCCTGGACTTCACGTCATCCGACCAGCTGACGGCAACGAAACCGTAGAAGCATACCGCTATGCCTT TACTCAAAAAGAACAACCAACCATGCTCGTTCTTAGCCGCCAAAACCTGCCAATTTTACCAAACAGCGCAGCAAAAGCGA AAACCGGTCTAGCAAAAGGTGCTTACATCTTAGCCGATTCCCCGCTTGATAAACTAGATATTATCTTACTCGCTTCTGGA TCCGAAGTACACCTAATGACAGCTGTCAGAGATAATCTTGCTAAAAAAGGCTTCGGCGCACGCGTAGTCAGCATGCCAAG CTTTGATTTATTCGACAAACAAAGCCCCGAATATAAAGAGTCCATTTTACCAAAAGCAGTGAAAAAACGCTTCGCCGCTG AAATGGGCGCCTCATACGGCTGGCACAAATACCTCGGTGATGCAGGCGAAATCCTCGCGATTGATTCGTTTGGGATGTCT GGCCCGGGAGACGAGCTGGCAGAACGATTTGGCTTTACTGTAGAGAACTTGACGGAACTTGCATTGAAGCAGTTGTAG Protein sequence : MSRIDEQMVNSIRVLSMDMIEKANSGHPGLPMGAAPMAFSLWKNHLKFNPEHPTWFNRDRFVLSAGHGSAMLYSLLHLFG YDLPMSELKNFRQTGSKTPGHPEFGHTVGVDATTGPLGQGFAMGVGMAMAEAHLGAKFNQPEFPVVDHNTYVLCGDGCLM EGISYEAASLAGHLKLGKLVVLYDSNDISLDGDLNESFSEDIELRFRAAGWQTLRVDDGNDLDALDAAIHLAKTEKSRPT LIEVKTVIGYGSPGKAGKSAAHGSPLGEKELKLAKEAYDWQMPPFELPKTVENQKEFYHSKGRASESSWLRTFNAYKQKY PALAESLQQLMDDNLNPDWDAELPVFDENADKPVATREVSGIVLQELEKKLPNLFGGAADLASSNKTNLKASERFAPGNY AAKNISFGVREFAMGAAVNGMTLHGGVQAFGATFFVFSDYLRSAIRSAALMGIPSTFIMTHDSIAVGEDGPTHEPIEHLA SFRAMPGLHVIRPADGNETVEAYRYAFTQKEQPTMLVLSRQNLPILPNSAAKAKTGLAKGAYILADSPLDKLDIILLASG SEVHLMTAVRDNLAKKGFGARVVSMPSFDLFDKQSPEYKESILPKAVKKRFAAEMGASYGWHKYLGDAGEILAIDSFGMS GPGDELAERFGFTVENLTELALKQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 4e-142 | 48 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 2e-139 | 46 |
