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Name : lin0290 (lin0290) Accession : NP_469635.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Virulence Product : internalin-like protein Function : - COG functional category : S : Function unknown COG ID : COG4886 EC number : - Position : 302762 - 304279 bp Length : 1518 bp Strand : + Note : - DNA sequence : ATGAACGTAAGAACTTTACTAGTTCGTGTTGGAGTAATATTAACTATGGCTTTAGGAATTAGTTTGTGGCTAGGCACGAG TCCGGGAATTGACGCACAAGCAGCAAGCCTTGCACAACCGACACCGATTAATGAAGTGTTTCCTGACACTCAAATGGCTT TAACAATGGCGAATAAACTAGGGAAAACAAAAGTTACTGATCTTGTTTCGCAAAGTGAATTGGATAGCCTGACCGAATTG AGATCTAATTTACCAATAGCTTCAATTGAAGGAATTCAGTATCTGACAAACTTAACAGAATTAAATATAAGTAATGCTGA AGTAAGTGATATAAGTGCTTTGAAAGATCTAACAAAATTAACAAAGTTAGAAATGTATCAGAATAATATTAGTGATATAA ACGTTTTGGAAAACCTGACGAACATAACAGATTTAGACTTACATGATAATCAGATAACGGATATAAGCCCCGTAAGAAAT TTGACTAATTTAGTTGTACTAAACTTATCTTATAATCAAATAAGTGATATTAGTGCAGTGTCAACTCTAAGTAAACTAAA CGATTTAGGGTTTACTGATAATCAAGTAAGCGATATTAGCGCAGTTGCTGGGTTAAACAATCTATCTAGTTTGAGTTTGG GTTATAACCAAATAAGCGACATAAGTATACTGACGAACTTAACCAATTTAGATGGTCTGAGTATAGACCATAATCAAATA AGTGACTTAACGCCAATAGCGAATTTGACCAATTTAACTTTCGTGGGTTTGCATAATAATCAAATAAGCGACTTAACTCC AATTGCAAATTTAACTAATTTAACAAGAATGTATTTATCAGGTCAGCAAATAACCAACAATCCAATACCTTATCACAGCA ATATTGCTATTCCTAACAATGTGAAAAATAATAAAAATGATGTTATCGCACCACTTGTAATAAGTAATGAAGGAACCTAT GACAATTCTAATGTTGTTTGGAATCTAGCTGATTATGTTAATAAAGTGAGTTATACTTTTTCACAACAGGTAACGATTGG TAGTGCCACAGAAACTTTCAATGGGACAGTAACACAGCCATTAGAGTTATATACTGTGACTTTTGATGTGGATGGAGTAA CAACTAACGAGACATTAGAGGCAGATACCCTACTAACCGAACCAACACCGCCAACAAAAGAAGGTTACACATTCACAGGC TGGTATGATGCAAAAACAAACGGTACTAAATGGGATTTTGAAACGGATAAAATGCCGGCGAAAGATATTACCTTATATGC TCAGTTTAGTGAGGATAAAGGCCCAGCAGATGATGATACTGACAAAGATACACCAAATGACCCTGCTATAAACGATGGAG ACGCGGTGCATTCTTTGGATAGTTCAGAACCACCTGCTGAGGTAAATGTAAATATATCACTACCAAAAACAGGCGATAGT CAAAACCCATTAGTTATTTTCATGGGACTGTTTCTGCTTGGTACAGGGATTATTTCGCTTCACAAAATACGCAATTAA Protein sequence : MNVRTLLVRVGVILTMALGISLWLGTSPGIDAQAASLAQPTPINEVFPDTQMALTMANKLGKTKVTDLVSQSELDSLTEL RSNLPIASIEGIQYLTNLTELNISNAEVSDISALKDLTKLTKLEMYQNNISDINVLENLTNITDLDLHDNQITDISPVRN LTNLVVLNLSYNQISDISAVSTLSKLNDLGFTDNQVSDISAVAGLNNLSSLSLGYNQISDISILTNLTNLDGLSIDHNQI SDLTPIANLTNLTFVGLHNNQISDLTPIANLTNLTRMYLSGQQITNNPIPYHSNIAIPNNVKNNKNDVIAPLVISNEGTY DNSNVVWNLADYVNKVSYTFSQQVTIGSATETFNGTVTQPLELYTVTFDVDGVTTNETLEADTLLTEPTPPTKEGYTFTG WYDAKTNGTKWDFETDKMPAKDITLYAQFSEDKGPADDDTDKDTPNDPAINDGDAVHSLDSSEPPAEVNVNISLPKTGDS QNPLVIFMGLFLLGTGIISLHKIRN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| inlD | AAB67970.1 | - | Virulence | Internalin | Protein | 3e-82 | 50 |
| inlC2 | AAB67969.1 | internalin | Virulence | Internalin | Protein | 1e-76 | 47 |
| inlH | CAA07457.1 | internalin H | Virulence | Internalin | Protein | 2e-77 | 47 |
| inlD | CAC20635.1 | internalin D | Virulence | Internalin | Protein | 4e-78 | 47 |
| inlE | CAA07458.1 | internalin E | Virulence | Internalin | Protein | 3e-83 | 41 |
| inlE | AAB67971.1 | - | Virulence | Internalin | Protein | 9e-84 | 41 |
| inlE | CAC20636.1 | internalin E | Virulence | Internalin | Protein | 5e-82 | 41 |
