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Name : lin0289 (lin0289) Accession : NP_469634.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Unknown Product : succinyl-diaminopimelate desuccinylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0624 EC number : - Position : 301402 - 302538 bp Length : 1137 bp Strand : + Note : similar to succinyldiaminopimelate desuccinylase; dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease contai DNA sequence : ATGGAACGAGAAAGAAAAATTCAAATCTTAAAAGACATTGTAAATATTGATTCGACTAATGGGCATGAGGAACAGGTTGC GAACTACTTACAGAAGTTGTTTGCTGAGTATGGTATTGAGTCTAAAAAGGTGCAATATGATGTAGACCGAGCTAGTCTTG TTAGTGAAATTGGTTCTAATGATGGCAAAGTTTTGGCGTTTTCAGGGCATATGGATGTGGTTGATGCTGGCGATGTATCT AAATGGAAGTTCCCGCCTTTTGAAGCAACGGAGCATGAAGGGAAAATATACGGACGTGGCGCGACGGATATGAAATCAGG TCTAGCGGCGATGGTTATTGCAATGATTGAGCTTCATGAAGAAAAACAAAAACTAAACGGTAAAATTAAATTATTAGCAA CAGTTGGTGAAGAAGTCGGTGAACTTGGAGCCGAACAACTAACGCAAAAAGGTTACGCAGATGATTTAGATGGTTTGATT ATCGGCGAACCGAGCGGACACAGAATCGTATATGCGCATAAAGGTTCCATTAATTATACCGTTAAATCCACTGGTAAAAA TGCCCATAGTTCGATGCCGGAATTTGGTGTTAATGCGATTGATAACTTGCTGCTATTTTATAATGAAGTAGAAAAGTTTG TGAAATCAATTGATGCTACTAATGAAATATTAGGCGATTTTATTCATAACGTCACCGTAATCGATGGTGGAAATCAAGTC AATAGTATTCCTGAAAAAGCGCAACTGCAAGGGAATATTCGCTCGATTCCAGAAATGGATAATGAAACAGTGAAACAAGT GCTAGTGAAGATTATCAATAAGTTAAACAAACAGGAAAATGTGAATCTGGAGTTAATATTTGATTATGACAAACAACCAG TATTTAGTGATAAAAATTCGGATTTAGTAAATGTTGCTAAGCGTGTAGCAAGTGACATTGTTAAAGAAGAAATCCCTTTA CTCGGTATTTCCGGAACAACCGATGCAGCAGAATTCACGAAAGCCAAAAAAGCATTTCCAGTAATTATTTTTGGACCAGG AAACGAAACGCCTCACCAAGTAAATGAAAATGTTTCTGTAGAGAATTATTTAGAGATGGTGGATGTGTACAAACGAATTG CGATAGAATTTTTATAA Protein sequence : MERERKIQILKDIVNIDSTNGHEEQVANYLQKLFAEYGIESKKVQYDVDRASLVSEIGSNDGKVLAFSGHMDVVDAGDVS KWKFPPFEATEHEGKIYGRGATDMKSGLAAMVIAMIELHEEKQKLNGKIKLLATVGEEVGELGAEQLTQKGYADDLDGLI IGEPSGHRIVYAHKGSINYTVKSTGKNAHSSMPEFGVNAIDNLLLFYNEVEKFVKSIDATNEILGDFIHNVTVIDGGNQV NSIPEKAQLQGNIRSIPEMDNETVKQVLVKIINKLNKQENVNLELIFDYDKQPVFSDKNSDLVNVAKRVASDIVKEEIPL LGISGTTDAAEFTKAKKAFPVIIFGPGNETPHQVNENVSVENYLEMVDVYKRIAIEFL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 3e-168 | 95 |
| unnamed | CAC20637.1 | - | Not tested | Internalin | Protein | 2e-166 | 94 |
