Gene Information

Name : lin2914 (lin2914)
Accession : NP_472241.1
Strain : Listeria innocua Clip11262
Genome accession: NC_003212
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2934186 - 2934809 bp
Length : 624 bp
Strand : -
Note : similar to ABC transporter, ATP-binding protein

DNA sequence : 
ATGATTGAATTAGTTAATGTCAGTAAAAAGATACAAGATAAATTGATTTTGGAAAAAGTCTCTCTTTCTATTGGAGCTGG
CGAATTTATTGCAGTCGTCGGCGAGAGTGGTAGTGGGAAGACAACGCTGCTAAATGTTATCGGACACCTAGATTCAAAAG
ATAGTGGGCAAGTTATTATTAACGAGATGGAATATCAGACGAAAAAAGAGGTTATGACTCTAAAAAAAGAGGTGTTAGGT
TTTATATTCCAAAATTATCTATTGATGGAAAATGAAACAGTGTTAGAAAACTTATCCATTACAGGTGGGGAAAATCGCAA
GCTGATGATAGAGCATTTGGAAGAAGTAGGAATGGATGAGAGCTATTTAGCAAAAAAAGTATACCAATTAAGTGGTGGAG
AAAAACAACGGATTGCTATTGTGCGCATTTTACTCAAACCATTTCAACTTTTACTTGCGGACGAACCAACTGGCAATTTA
GATGATAAAAACAAACAAAAAATCATTGAATTATTTCTAGCCTTGAAAAAGCAAGGTAAGACTATCGTTTGTGTCACGCA
TGACCCGGAAATATCAGGAAAAGCAGATCGGGTCATTTATATTGAGAAGGGAGAAATAAGATGA

Protein sequence : 
MIELVNVSKKIQDKLILEKVSLSIGAGEFIAVVGESGSGKTTLLNVIGHLDSKDSGQVIINEMEYQTKKEVMTLKKEVLG
FIFQNYLLMENETVLENLSITGGENRKLMIEHLEEVGMDESYLAKKVYQLSGGEKQRIAIVRILLKPFQLLLADEPTGNL
DDKNKQKIIELFLALKKQGKTIVCVTHDPEISGKADRVIYIEKGEIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 5e-30 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lin2914 NP_472241.1 hypothetical protein NC_012469.1.7686946. Protein 2e-29 42
lin2914 NP_472241.1 hypothetical protein CP001581.1.gene598.p Protein 4e-27 41
lin2914 NP_472241.1 hypothetical protein CP001581.1.gene798.p Protein 2e-22 41