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Name : serS (lin2890) Accession : NP_472218.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2902992 - 2904275 bp Length : 1284 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAGATGTTAAGTTGTTACGTAATAATTTTGAAGAAGTAAAGCAGAAGTTGCAAAATCGCGGGGAAGACTTGGGTGA ATTTGAGAAATTTGGCGAGTTAGACAAACGTCGTCGTACTCTGATTGTGGAAACAGAAGCGCTAAAAAGCCAGCGTAATG AAGTATCTCAAGAAATCGCTAAATTAAAACGCGAAAAACAAGATGCTGATGCTAAAATTGAAGAAATGCGTGTCGTTGGT GATCGTATTAAAACATTAGACATCGAATTAAGAGAAATTGACGAGAAGTTAGATACGATTTTAATGTCGATTCCAAATAT TCCGCATGAGTCTACTCCGGTCGGTGAATCGGAAGACGATAACGTAGAAATCCGCAAATGGGGTGAAGTTCGCGAATTTG ATTTTGAACCAAAAGCTCATTGGGATTTAGGAACTGACCTAGACATTCTTGATTTCGAAAATGCTGCAAAAGTAACTGGC AGCCGCTTCGTTTTTTATAAAAAATTAGGTGCAAGACTGGAACGAGCGCTAATTAACTTTATGATGGACTTGCATTCGAA TGAACATGGCTATGAAGAAATGCTTCCACCGTACATGGTAAACCGCGCGAGCATGACTGGAACTGGTCAATTGCCAAAAT TTGAAGAAGATGCATTTTTAATTGAAGCAGAAGATTATTTCCTTATCCCAACAGCGGAAGTACCAGTAACAAACTACCAC CGCGAAGACATTTTAAAAGCAGAAGATTTACCAAGAAAATATACAGCATTTAGCGCATGTTTCCGTTCTGAAGCGGGATC TGCGGGTCGTGATACGCGTGGCTTAATTCGCCAACATCAATTTAACAAAGTGGAATTAGTTCAATTTGTTAAACCGGAAG ATTCCTACGCGGCGCTTGAAAAATTAACTGGATGCGCAGAAGAAGTATTGCGTCGCCTAGAATTACCATATCGCGTACTA AGCATGTGTACTGCTGATTTAGGCTTCACTGCTGCTAAAAAATATGATTTAGAAGTTTGGATTCCAAGCTATGATTCTTA CCGTGAGATTTCTTCTTGCAGTAACTTTGAAAGCTTCCAAGCAAGACGCGCCAACATTCGTTTCCGCCGTGAACCAGGAA GCAAACCCGAATACGTGCACACATTAAATGGTTCCGGGTTAGCACTAGGTCGAACAGTCGCTGCTATTTTGGAAAACTAC CAAGAGGCAGATGGATCTGTACTCATTCCGAAAGTACTACAAGGTTATATGGGCGGTATCGAAAAAATCGAATTACCAAA ATAA Protein sequence : MLDVKLLRNNFEEVKQKLQNRGEDLGEFEKFGELDKRRRTLIVETEALKSQRNEVSQEIAKLKREKQDADAKIEEMRVVG DRIKTLDIELREIDEKLDTILMSIPNIPHESTPVGESEDDNVEIRKWGEVREFDFEPKAHWDLGTDLDILDFENAAKVTG SRFVFYKKLGARLERALINFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDAFLIEAEDYFLIPTAEVPVTNYH REDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLIRQHQFNKVELVQFVKPEDSYAALEKLTGCAEEVLRRLELPYRVL SMCTADLGFTAAKKYDLEVWIPSYDSYREISSCSNFESFQARRANIRFRREPGSKPEYVHTLNGSGLALGRTVAAILENY QEADGSVLIPKVLQGYMGGIEKIELPK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-130 | 62 |
