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Name : lin2830 (lin2830) Accession : NP_472158.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit A Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2060 EC number : 3.6.3.12 Position : 2845522 - 2847207 bp Length : 1686 bp Strand : - Note : highly similar to potassium-transporting atpase a chain; catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions DNA sequence : ATGAAGTATATCGTGATGCAAGATGTGTTTTTTATTGTATTGTTATTAGTTTTGGCGGTGCCTCTTGGGATTTATATGTA TAAAGTGATGATTGGGGAAAAGGTGTTTTTGTCACGAGTGCTAGAGCCTGTTGAACGCTTTGGTTATCGGTTGATGGGTG TGAATGCGGCTGGGATGTCAGCGAAGCGTTATGCTGGATCTGTTCTTGCTTTTAGTGCGGTTGGTTTTATATTTGTGATG GCGGTGCTGATGTTACAAGGGTTTTTACCGCTTAATCCAGAAGGTATGAAGGGGCTTAGCTTTAGTCTTGCGTTTAATAC GGCAGCGAGCTTTGTGTCGAATACGAACTGGCAAGCTTACTCTGGTGAGGCGGCTTTATCGTATTTTTCGCAGTCAATTG GCTTAACTGTACAGAATTTTGTTTCAGCGGCGACGGGGATTGCAGTGTTATTTGCGGTGATTCGTGGCTTTATATGGAAG AAACAGAAAACCGTGGGCAATTTTTGGCAAGATTTATTTAGGGTGACGCTTTATATTTTACTACCGCTTTCGCTTGTTTT GGCAATTCTTTTGGTGTCACAAGGTGTGGTGCAATCATTCGCTGATTATTCGGTGGTTGAATCGCTTGAAAATGGAGCAA AACAACTGATTCCGCTTGGTCCAGCTGCAAGTCAAATTGCGATTAAGCAACTGGGGACGAATGGTGGGGGCTTTTTCGGG GCAAATTCGGCGTTTCCTTTTGAAAATCCGTCGAGTTTTACTAATTTATTAGAGATGCTTGCGATTTTGCTTATTCCTGT GGCGCTTGTTGTGATGTTTGGACGTGCGGTGAAGGACAGTAAACAAGGACGTGCAATTATGACAGCGATGATGATTGTGT TTGTTGTTGGAGTGGTTGCGATTACGATTTCAGAACAATTCGCTGGTCCAAGTTATCAAGGTGTTACTACTTCTGGAAGT ATGGAAGGTAAAGAGGTGCGTTTTGGTGTTGGCGGATCGTCGCTTTTTGCGGCTTCTACAACGGCTGCTTCAAATGGCGC TGTGAACGCGATGCACGATAGCTTGACTCCGCTCGGTGGGCTAGTTCCAATGTTCTTTATGCAGCTTGGTGAAGTTATTT TTGGCGGTGTTGGTAGTGGGCTTTATGGAATGATTGGCTTTATTATTTTGACGGTGTTTATCGCTGGGCTTTTGGTTGGG CGGACACCGGAATATTTAGGGAAGAAAATTGAACCATATGATATGAAAATGGTTTGTTTACTCATTTTAGTTCCACCGTT ATTAACTTTATTTGGAACTGCGGTTGCGGTAATGATGCCGAGTGTGCAGGCTTCCGTTTCGGCGAGTGGGGCGCATGGTT TTTCTGAGGTGCTCTATGCTTTCACCTCTATGGGAAATAATAATGGTAGTGCTTTTGCTGGATTTGCGGCAGACACGACG TTTACAAATATGGTCGGCGCGGTAATGATGTTGCTAGCGCGATTTATCCCGCTGATTGCGGCACTTTACTTGGCTCAAAA TATGGCTGGAAAGAGTCCGGTTGCAGCAAGTAGTGGAACGTTATCGACGAAAAATGGCATGTTTATCGGTCTTTTAATTG GAGTAGTGGTGCTTGTTGGCGCACTTAGTTTCTTGCCGGCGCTTGCACTAGGACCGATTGCGGACTTCTTTACAACTTTC AAATGA Protein sequence : MKYIVMQDVFFIVLLLVLAVPLGIYMYKVMIGEKVFLSRVLEPVERFGYRLMGVNAAGMSAKRYAGSVLAFSAVGFIFVM AVLMLQGFLPLNPEGMKGLSFSLAFNTAASFVSNTNWQAYSGEAALSYFSQSIGLTVQNFVSAATGIAVLFAVIRGFIWK KQKTVGNFWQDLFRVTLYILLPLSLVLAILLVSQGVVQSFADYSVVESLENGAKQLIPLGPAASQIAIKQLGTNGGGFFG ANSAFPFENPSSFTNLLEMLAILLIPVALVVMFGRAVKDSKQGRAIMTAMMIVFVVGVVAITISEQFAGPSYQGVTTSGS MEGKEVRFGVGGSSLFAASTTAASNGAVNAMHDSLTPLGGLVPMFFMQLGEVIFGGVGSGLYGMIGFIILTVFIAGLLVG RTPEYLGKKIEPYDMKMVCLLILVPPLLTLFGTAVAVMMPSVQASVSASGAHGFSEVLYAFTSMGNNNGSAFAGFAADTT FTNMVGAVMMLLARFIPLIAALYLAQNMAGKSPVAASSGTLSTKNGMFIGLLIGVVVLVGALSFLPALALGPIADFFTTF K |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpA | NP_814333.1 | potassium-transporting ATPase subunit A | Not tested | Not named | Protein | 4e-88 | 57 |
| ef0087 | AAM75290.1 | EF0087 | Not tested | Not named | Protein | 3e-88 | 57 |
| kdpA | YP_251948.1 | potassium-transporting ATPase subunit A | Not tested | SCCmec | Protein | 1e-51 | 43 |
| kdpA | NP_373308.2 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-50 | 42 |
| kdpA | YP_190030.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-50 | 42 |
| unnamed | BAB43902.1 | potassium-transporting ATPase(A chain) | Not tested | Type-II SCCmec | Protein | 2e-50 | 42 |
| SAR0070 | YP_039538.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-50 | 42 |
| truncated-kdpA | NP_370596.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-50 | 42 |
