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Name : lin2809 (lin2809) Accession : NP_472138.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 2824178 - 2826193 bp Length : 2016 bp Strand : - Note : similar to transketolase DNA sequence : TTGAAAAAAACATTAGATAGACAAGCTGTGGACACGATTCGTTCGTTATCCATTGATATGATTGAGAAAGCAAACTCAGG GCACCCAGGAATGCCGATGGGAGCTGCTCCAATGGCGTATATGCTATTTGCAAAACATTTAGTATTTAACCCAGCCAACC CAGAATGGTTTAACCGCGACCGATTTGTCTTATCAGCAGGGCACGGGTCCGCGCTACTTTATAGCATGCTTCATCTATTT GGTTATGATGTGAAAATGGAGGACTTAAAACAGTTCCGTCAATTAGATAGTTTGACACCAGGACACCCTGAATTTGGATG GACTGCGGGAGTTGATGCAACGAGTGGCCCACTTGGACAAGGGATTGGTATGGCCGCTGGTATGGCGCTGGCAGAATCTC ATTTAGCGGCTGAGTATAACCAACCAAATTATCCAATTGTCGACCATTATACGTATGCGATTTGTGGTGACGGGGACTTG ATGGAAGGTGTGGCATCAGAAACAGCCTCACTTGCAGGGCATTTAGGACTTGGAAAATTAATCGTATTGTACGATTCCAA TGATATTTGTTTAGATGGCGATTTAAGTGCAACGTTCAGTGAAAATGCAGCAGATCGTTTCCGTGCATACGGCTGGCAAG TTTTACGCGTAGAAGATGGCAACAATTTAGCAGCAATTCAAGAGAAAATTGTTCAAGCAAAATTAGAAACATCAAAACCA ACGCTAATCGAAGTGAAAACAGTCATCGGTTACGGTGCGCCAACAAAAGCAGGAAGCTCTGCAAGTCACGGTGCTCCGCT TGGTGAAAAAGAAGCGAATGGCGCGAAAGAACATTATGAATGGGCAGAAGAACCTTTCACAGTACCAGCTGAAGTTCGTG ATTATTTAAGAAATTACAAAGCTCGCGGGGAAAAACTAGAGGGTGCTTGGAACACGATGCTCGCTAATTACAAAAAAGAA TTCCCAGAACTTGCAAGGCAATTAGACCGAGTGTTAGCGGGAGAAGTAGCAGCTGATTGGAACGCCAATTTGCCAACTTT CGAAGCAGGTACAAATATTGCAACACGCTCTGCTTCTGGAAAAATGATTAACGCAATTGCAGCCGAATTACCGGAACTTT TCGGGGGATCTGCTGACTTAGGTTGTTCGAACAAAACATTTATTGATGCGAGCCCAGCATACAGCATTCAAGACCCAGCT GGTAAAAATATCTGGTTCGGTGTGCGCGAATTTGCGATGGGAGCAATGTTAAACGGAATGGCGCTTCATAGCGGTTTACG AGTATTTGGCTCCACTTTCTTCGTCTTCTCAGACTATGTGCGTCCAGCAATGCGGATGGCTGCTTTAATGCAACTCCCAG TAACGTATGTATTCACGCATGACAGTATCGCTGTAGGTGAAGACGGCCCGACACATGAACCAATCGAACAACTAGCCTCA CTCCGTGCCATGCCAGGCCTAACAGTTATCCGCCCAGCCGATGCCAAAGAAACTCGCGCTGCTTGGGAAATTGCTGCAAC CAACACGCATGGTCCAATCGCTCTTGTACTATCACGCCAAGACTTACCAGTACTTGAAAATGCACAAGAAGAAGTAGATG CAGGTGTAGATAAAGGTGCTTATATCGTAGCACCAGCAAATAGTTCCAAACCAGACGCTATCATTATCGCAACAGGATCC GAAGTGTCCCTTGCAATTGAAGCGAAAGCCGAACTTGCGAAAAAAGATATCGACGTTTCCGTTGTTAGTTTGTCCAGCTG GGAACGCTTTGAAAAAACAACCGATGCTTATAAAGAAAGCATTTTACCAAAAGAAGTCACAGCGAGATTTGCGATTGAAG CTGGAGCAACATTCGGTTGGAAAGAATTTATTGGGTCAGAAGGCGATATGTTAGGAATCAATCACTTCGGCGCATCTGCC CCTGCGAAAGATTTGTTTAACGCTTATGGATTTACACCAGAAAATGTGGCGGATCGTGTCGAAGCTGTGATTGCGAAAGC CGGTGTGCGCGTATGA Protein sequence : MKKTLDRQAVDTIRSLSIDMIEKANSGHPGMPMGAAPMAYMLFAKHLVFNPANPEWFNRDRFVLSAGHGSALLYSMLHLF GYDVKMEDLKQFRQLDSLTPGHPEFGWTAGVDATSGPLGQGIGMAAGMALAESHLAAEYNQPNYPIVDHYTYAICGDGDL MEGVASETASLAGHLGLGKLIVLYDSNDICLDGDLSATFSENAADRFRAYGWQVLRVEDGNNLAAIQEKIVQAKLETSKP TLIEVKTVIGYGAPTKAGSSASHGAPLGEKEANGAKEHYEWAEEPFTVPAEVRDYLRNYKARGEKLEGAWNTMLANYKKE FPELARQLDRVLAGEVAADWNANLPTFEAGTNIATRSASGKMINAIAAELPELFGGSADLGCSNKTFIDASPAYSIQDPA GKNIWFGVREFAMGAMLNGMALHSGLRVFGSTFFVFSDYVRPAMRMAALMQLPVTYVFTHDSIAVGEDGPTHEPIEQLAS LRAMPGLTVIRPADAKETRAAWEIAATNTHGPIALVLSRQDLPVLENAQEEVDAGVDKGAYIVAPANSSKPDAIIIATGS EVSLAIEAKAELAKKDIDVSVVSLSSWERFEKTTDAYKESILPKEVTARFAIEAGATFGWKEFIGSEGDMLGINHFGASA PAKDLFNAYGFTPENVADRVEAVIAKAGVRV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 1e-137 | 49 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 7e-138 | 45 |
