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Name : lin2523 (lin2523) Accession : NP_471853.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1120 EC number : - Position : 2545451 - 2546242 bp Length : 792 bp Strand : - Note : similar to Bacillus subtilis ferrichrome ABC transporter (ATP-binding protein) FhuC DNA sequence : ATGAAACCTGCATTAGAACTAAAAAATATTTCTTTCTCACGTAAAAGAGATTTTGAAATGAAAGACGTGAGTGCACGCAT TCCAGAAGGTAAAATCACAACACTTATCGGTCCAAATGGTTCAGGTAAATCAACTATGCTTCGTTTGATGATGCGCCTTT TGACACCTGATAGTGGAGAAGTTTTGCTTGATGAAAAAAATATTAAGGATATTCCTTCTAAAGATTTAGCGAAGAAAATG ACGATGTTATCTCAAGCCCCTGAAGGTTTAGTTGATGTTATGGTGCATGACTTGGTGGCTTATGGACGTTTGCCGCACAG AAGTTGGCTTTCTACTTTACAAGAAGATGATGAGGCGGTTATTCAGTGGGCAATTAAAGTGTGTAACTTAGAAAATCTGG CGTATCGACCACTTCACTCGTTATCGGGTGGTGAACGTCAACGTGCGTGGCTTGCAATGGCTCTTGCGCAAAAAACACCT ATTTTACTACTTGATGAACCAACGACATATCTAGATATTGCCCATCAACTTGAGCTTTTAGATTTGTTAGTTCATTTAAA TAAAGAATATAATTTAACGATTGTGTTAGTGTTACATGATTTAAATCAAGCTGCAATCTACAGTGATTATGTTTTTGTTT GCGAAAATGGTGGATTAGTCAAAAATGGTACGCCTCAAGAAGTTTTTACAACGGAGCTTTTGCGAAATGTCTTTCATATT ACAGCAGATATTACTGAAAAAGATGGAAAACAGCACATTCATCCGCTTGCTTCGACTAGATTTGAATATTAA Protein sequence : MKPALELKNISFSRKRDFEMKDVSARIPEGKITTLIGPNGSGKSTMLRLMMRLLTPDSGEVLLDEKNIKDIPSKDLAKKM TMLSQAPEGLVDVMVHDLVAYGRLPHRSWLSTLQEDDEAVIQWAIKVCNLENLAYRPLHSLSGGERQRAWLAMALAQKTP ILLLDEPTTYLDIAHQLELLDLLVHLNKEYNLTIVLVLHDLNQAAIYSDYVFVCENGGLVKNGTPQEVFTTELLRNVFHI TADITEKDGKQHIHPLASTRFEY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fecE | AAL08451.1 | ATP-binding protein FecE | Virulence | SRL | Protein | 4e-38 | 50 |
| iusE | YP_005143742.1 | iron ABC transporter ATP-binding protein | Virulence | Not named | Protein | 7e-37 | 49 |
| SPN23F_09560 | YP_002510939.1 | ferric siderophore ABC transporter ATP-binding protein | Virulence | PPI-1 | Protein | 2e-40 | 47 |
| SP_1035 | NP_345510.1 | iron-compound ABC transporter ATP-binding protein | Not tested | PPI-1 | Protein | 2e-40 | 47 |
| fagC | YP_005682397.1 | ATP binding cytoplasmic membrane protein | Virulence | PiCp 1 | Protein | 3e-42 | 45 |
| fagC | YP_005684488.1 | ATP binding cytoplasmic membrane protein | Not tested | PiCp 1 | Protein | 3e-42 | 45 |
| fagC | YP_005680307.1 | ATP binding cytoplasmic membrane protein | Not tested | PiCp 1 | Protein | 3e-42 | 45 |
| fagC | YP_003782430.1 | ABC transporter ATP-binding protein | Not tested | PiCp 1 | Protein | 3e-42 | 45 |
| DIP0585 | NP_938961.1 | iron ABC transporter ATP-binding protein | Virulence | Not named | Protein | 4e-32 | 41 |
| ciuD | YP_005681255.1 | Iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 6e-33 | 41 |
| ciuD | YP_005683346.1 | Iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 6e-33 | 41 |
| ciuD | YP_003783391.1 | iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 6e-33 | 41 |
| ciuD | YP_005685432.1 | Iron ABC transporter ATP-binding protein | Virulence | PiCp 4 | Protein | 6e-33 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lin2523 | NP_471853.1 | hypothetical protein | BAC0164 | Protein | 2e-38 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lin2523 | NP_471853.1 | hypothetical protein | VFG1042 | Protein | 2e-38 | 50 |
| lin2523 | NP_471853.1 | hypothetical protein | VFG0925 | Protein | 9e-34 | 43 |
