Gene Information

Name : lin2512 (lin2512)
Accession : NP_471842.1
Strain : Listeria innocua Clip11262
Genome accession: NC_003212
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1464
EC number : -
Position : 2535457 - 2536287 bp
Length : 831 bp
Strand : -
Note : conserved lipoprotein (putative ABC transporter binding protein)

DNA sequence :
ATGAAAAAGGTTCTTGGTTTAATTTTCACATTAAGTTTAGTTTTAGTACTTACAGCTTGCGGTGGCTCCTCAGATAAAGC
TTCATCTAGTAAAGACGATAATAAATTGGTAGTGGGTGCGTCAAATACTCCTCATGCCCAAATCTTAGAACAAGCAAAAC
CTATCTTAAAAGATAAAGGGATTGACTTGAAAATTGTTAAATATACAGACTACGTTATGCCTAATAAAGCCCTAGAAGAA
GGCGATTTAGATGCTAACTACTTCCAACATAAACCATATCTTGAATTAGAAGAAAAAGAAAAAGGTTACAAATTTGCTGA
TGTCGGTGCTATTCACATCGAACCAATGGGCATTTATTCTAAAAAAGTAAAAGATATTAAAGATTTAAAAGACGGCGCGC
AAGTTTTACTTTCTAACTCAAAATCTGACTGGCCGCGTGTTATTGGGATTTTTGTAGACAATGGACTTTTAACACTTAAA
GATGGCGTGAAACCACAAGATGCAACATTTGACGACATTAAAGATAATCCGAAAAACTTGAAATTCAAATATGATTTTGA
CCCAGCTTACTTGATGACTGCATATAATAATGAAGAAGGCGATGTTGTCGCTATTAACTCAAACTTTGTTGTAGACCAAG
GCTTAAACCCTTCGAAAGATGCTATTGCAATCGAAAGCAAAGATTCTCCGTATGCTAATATTGTTGTAACTACTGACAAG
AAAAAAGACGACAAAAACATTAAAGAACTAGTTAAGGTGTTACATTCAAAAGAAATTCAAGATTACATTACGAAAGAATG
GGACGGAGCAGTTGTTCCAGTTGATAAGTAA

Protein sequence :
MKKVLGLIFTLSLVLVLTACGGSSDKASSSKDDNKLVVGASNTPHAQILEQAKPILKDKGIDLKIVKYTDYVMPNKALEE
GDLDANYFQHKPYLELEEKEKGYKFADVGAIHIEPMGIYSKKVKDIKDLKDGAQVLLSNSKSDWPRVIGIFVDNGLLTLK
DGVKPQDATFDDIKDNPKNLKFKYDFDPAYLMTAYNNEEGDVVAINSNFVVDQGLNPSKDAIAIESKDSPYANIVVTTDK
KKDDKNIKELVKVLHSKEIQDYITKEWDGAVVPVDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAAV_0786 YP_003281709.1 ABC transporter substrate-binding protein Not tested SaPIAv Protein 3e-54 50