Gene Information

Name : lin2402 (lin2402)
Accession : NP_471733.1
Strain : Listeria innocua Clip11262
Genome accession: NC_003212
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 2431065 - 2431547 bp
Length : 483 bp
Strand : -
Note : similar to single-stranded DNA-binding protein

DNA sequence :
ATGATGAATCGTGTCGTGCTCGTAGGACGTTTAACTAAAGATCCAGAGCTAAGATATACGCCAGCGGGTGTAGCAGTTGC
GACTTTTACACTTGCTGTCAATCGACCTTTTAAAAACGGGCAAGGAGAACAAGAAGCTGATTTTATTCAATGTGTTGTTT
GGCGTAAACCAGCAGAAAACGTCGCTAATTTCTTAAAAAAAGGAAGCTTGGCAGGCGTTGATGGACGCGTACAAACTCGT
AATTACGAAGGTAACGATGGTAAGCGTGTTTATGTGACGGAAATAGTGGCTGAATCAGTTCAATTTTTAGAGTCTAAGCA
AAACGGCGCAGGAGGCTCTACATCGAATAATAATCAGAGCGAGACTAATTATTCAAATGACAATAAAACAAGCTCATATC
GAGCTGATAGGAGCCAGAATGGTGATTCATTTGCGAATGAAGGTGCGCCGGTTGATATCAATCCGGACGACTTGCCATTT
TAA

Protein sequence :
MMNRVVLVGRLTKDPELRYTPAGVAVATFTLAVNRPFKNGQGEQEADFIQCVVWRKPAENVANFLKKGSLAGVDGRVQTR
NYEGNDGKRVYVTEIVAESVQFLESKQNGAGGSTSNNNQSETNYSNDNKTSSYRADRSQNGDSFANEGAPVDINPDDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 5e-34 54
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 2e-40 54
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 2e-40 54
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-40 54
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 1e-40 54
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 9e-40 54
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 2e-40 54
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 2e-37 49
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 2e-37 49
EFAU085_00699 YP_008394223.1 single-strand binding protein Not tested Not named Protein 2e-24 46