|
Name : lin2196 (lin2196) Accession : NP_471529.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Unknown Product : argininosuccinate lyase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0165 EC number : - Position : 2215353 - 2216723 bp Length : 1371 bp Strand : + Note : similar to argininosuccinate lyase; catalyzes the formation of arginine from (N-L-arginino)succinate DNA sequence : ATGGAAAAACTATGGGGCGGACGTTTTCAAGGGAAAAGTGAAGCATGGATTGATGACTTTGGTGCTTCGATTTCTTTTGA TCAAAAAATGGCAAAAGAAGACTTGGCGGGAAGCTTGGCACATGTCGCAATGCTAGCAAAATGTGGTATTATTTCTGATT CTGAGGCGAGTGAAATTACAGCTGGGCTAAAAATCCTCCAAGAAAAATTAGCGCTTGGGGAACTGGAATTTAGTACTGTA AACGAAGATATTCATTTAAATATCGAAAAACTGTTACACGAGGAAATCGGGCCTGTCGCGGGAAAACTTCATACGGCGCG TAGTCGGAATGACCAAGTTGCAACAGACATGCATTTGTATTTAAAAGAAGCAGTCGCAGAAATTATTCAATCGTTAAAAC ATTTGCGCGCGGTGCTTGTCCAAAAAGCGGAGGCGAACGTCGAAACGATTATGCCTGGCTATACACACTTGCAACACGCC CAACCCATCTCTTTTGCGCATCATTTATTAGCTTATTTTGGTATGTTTACACGTGATTTAGAGCGTTTAGAAGAAAGCGT CAAACGGATTGATATTTCGCCACTTGGGTCTGCGGCGCTCGCTGGAACGACTTTTCCAATTGATCGGGCCTATAGCGCTG AACTTCTTGGTTTTTCCGCTGTTTATGAAAATAGCTTAGACGGCGTGAGCGATCGTGATTTTATTATCGAGTTTCTTAGT AACAGTTCTATTTTAATGATGCATTTATCGCGTTTTTGTGAAGAATTGATACTTTGGACGAGCCATGAATTTCAATTTGT GGAATTAACGGACGCTTTTTCAACAGGAAGTTCGATTATGCCACAAAAGAAAAATCCTGATATGGCCGAATTAATTCGTG GGAAAACGGGTCGTGTTTACGGAAACCTTTTCGGCATGTTAACAGTTTTAAAGGGGCTGCCGCTCGCTTATAATAAAGAT TTACAAGAAGATAAAGAAGGCATGTTTGATACGCTTGAGACGGTTCATACAAGCTTAGATATATTCGCAGGAATGATTGA AACGATGAAGGTCAATGCAGATATAATGGAAGAATCGACGCAAAAAGATTTTTCCAATGCGACCGAACTAGCGGATTATC TCGCGAAAAAAGGCGTTCCATTTAGAGAAGCGCATGAGATTGTTGGGAAATTGGTGCTTGAATGTACGCAAAATGGGATT TATTTGCAAGACGTCGCATTTAGCCACTACCAAGAAATCCATCCGCTTATTGAGGAAGACATTTATACTGTTCTTGCTTC AAAAACAGCGGTTCAAAAGAGAAATTCATATGGCGGTACGGGGTTTGATCAAATCCACGTTGCACTCGCCAATGCGAAAA AAACATTATAA Protein sequence : MEKLWGGRFQGKSEAWIDDFGASISFDQKMAKEDLAGSLAHVAMLAKCGIISDSEASEITAGLKILQEKLALGELEFSTV NEDIHLNIEKLLHEEIGPVAGKLHTARSRNDQVATDMHLYLKEAVAEIIQSLKHLRAVLVQKAEANVETIMPGYTHLQHA QPISFAHHLLAYFGMFTRDLERLEESVKRIDISPLGSAALAGTTFPIDRAYSAELLGFSAVYENSLDGVSDRDFIIEFLS NSSILMMHLSRFCEELILWTSHEFQFVELTDAFSTGSSIMPQKKNPDMAELIRGKTGRVYGNLFGMLTVLKGLPLAYNKD LQEDKEGMFDTLETVHTSLDIFAGMIETMKVNADIMEESTQKDFSNATELADYLAKKGVPFREAHEIVGKLVLECTQNGI YLQDVAFSHYQEIHPLIEEDIYTVLASKTAVQKRNSYGGTGFDQIHVALANAKKTL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00324 | YP_008207789.1 | Argininosuccinate lyase | Not tested | AbaR25 | Protein | 3e-121 | 54 |
| BJAB0868_00328 | YP_008211654.1 | Argininosuccinate lyase | Not tested | AbaR26 | Protein | 3e-121 | 54 |
