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Name : lin0223 (lin0223) Accession : NP_469568.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 219802 - 221463 bp Length : 1662 bp Strand : + Note : similar to oligo-1,6-glucosidase DNA sequence : ATGAAAGAAAAAGACTGGTGGAAAAAAAGCGTAGTTTACCAAATCTATCCAAAGAGTTTCAATGACTCAAATGGCGATGG AGTCGGTGATATTCAAGGGATTATTGAGAAATTAGATTATTTAAAAGAGCTTGGCGTAGACGTTATCTGGCTATCTCCGG TGTATGATTCGCCGCAAGATGACAATGGATACGATATTCGCGATTACCAAAAAATTTACGAAGAATATGGCGATATGGCA ACGTTTGACAATCTGTTACAAGGTTTACATGATCGTGATATGAAACTCGTAATGGATTTAGTTGTTAACCACACTTCCGA CGAACATAAATGGTTTGAAGAATCTCGGAAATCCAAAGACAACCCTTATCGTGATTACTATTTCTGGCGTGAAGAAAATG AAATCAACAACTGGGGCTCGATTTTCAGTGGTCCAGCATGGGAATTGGACGAGAAAACAGGCGAGTACTACTTACACCTT TTCTCTAAAAAACAACCAGATTTAAACTGGGAAAATCCTAAATTACGCCAAGATGTATATAATATGATGAAATTCTGGCT TGATAAAGGTATCGATGGGTTCCGCATGGACGTAATTAACTTCATTTCCAAAAACACAGCTTTCCCAGATGGACCAGTTG CAGAAGGTCAAATTTACGGAGATGCAGGTAACGATTTTTGCAATGGACCACGTATTCATGAGTTCTTGCAAGAGATGAAC CAAGAAGTAACTTCCAAATATGATGTAATGACTGTTGGCGAAATGCCAGGTGCTAGCACAACTGACGCGCAAATTTATAC AAATCCAGCAAATAATGAAGTGGATATGATTTTTACATTTGAACATATGAACCTAGACTCCGATGGTGATAACAAATGGG ATCTAAAACCAATTTATTTACCAGATTTAAAAGAAAATATGTCCGAGTGGCAAGTAGCGCTTCAAGAAAACGGCTGGAAC AGTTTATATTGGAACAATCATGACCAACCACGTATTGTTTCTCGTTTTGGGAATGATAATCGTTTCCGCGTTCGTTCGGC GAAAATGCTTGCAACATGTCTGCACATGATGAAAGGAACACCGTACATTTATCAAGGTGAAGAAATCGGGATGACTAATG TTCATTTTGAAACGCTGGAAGAATATCGAGATATAGAAACATTAAACATGTATAAAGAACGTAAAGAGCAAGGACACAGC CACGAAAGCATTATGCAGTCTATTTACACTAAAGGACGCGACAACGCAAGAACACCATACCAGTGGGATAATAGCGAAAA TGCTGGCTTCACAACCGGAACGCCGTGGCTTAAAGTTAACCCGCGTTATACAGAAATCAACAACGAAGAAGCGCTGAAAA ATCCAGATTCGATTTTCTACTACTACCAAAACCTAATTAAGTTACGCAAAACAACAGAAATCATCACAACTGGTAATTAT CGCCTGTTGTTACCAAAAGATGAAGCGATTTTCGCATATGAACGTTATACAGAAAATGAAAAATTAGTCGTTTTATGTAA TTTCACAGAAGAAGAGCAAGTTCTTACCGATGAAAATATTTTAAACGACATCAAAAAAGGCTCCGTACTTGCAAATAATG TTCCTGATATTATAGAAGGAACTTTACGACCATACGAAGCGATAGTTTATCAAATTAAATAA Protein sequence : MKEKDWWKKSVVYQIYPKSFNDSNGDGVGDIQGIIEKLDYLKELGVDVIWLSPVYDSPQDDNGYDIRDYQKIYEEYGDMA TFDNLLQGLHDRDMKLVMDLVVNHTSDEHKWFEESRKSKDNPYRDYYFWREENEINNWGSIFSGPAWELDEKTGEYYLHL FSKKQPDLNWENPKLRQDVYNMMKFWLDKGIDGFRMDVINFISKNTAFPDGPVAEGQIYGDAGNDFCNGPRIHEFLQEMN QEVTSKYDVMTVGEMPGASTTDAQIYTNPANNEVDMIFTFEHMNLDSDGDNKWDLKPIYLPDLKENMSEWQVALQENGWN SLYWNNHDQPRIVSRFGNDNRFRVRSAKMLATCLHMMKGTPYIYQGEEIGMTNVHFETLEEYRDIETLNMYKERKEQGHS HESIMQSIYTKGRDNARTPYQWDNSENAGFTTGTPWLKVNPRYTEINNEEALKNPDSIFYYYQNLIKLRKTTEIITTGNY RLLLPKDEAIFAYERYTENEKLVVLCNFTEEEQVLTDENILNDIKKGSVLANNVPDIIEGTLRPYEAIVYQIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 1e-150 | 56 |
