Gene Information

Name : lin0022 (lin0022)
Accession : NP_469369.1
Strain : Listeria innocua Clip11262
Genome accession: NC_003212
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3715
EC number : -
Position : 24634 - 25437 bp
Length : 804 bp
Strand : +
Note : similar to PTS system, fructose-specific IIC component

DNA sequence :
ATGGATTTAGCGGTTTGGCAGATTATATTGTTAGTTATACTTGCGGCTTGTACCATTCTTGATGCTTTAACTTTAGTAAT
AGGACTTAATTTCCCTGTAATAACAGGGACACTTGCTGGAATCATTATGGGTGACATGGTGCTCGGACTTGCAATTGGGG
CAACGTTACAGCTGATGGTGCTTGGTGTCGGTACATACGGCGGCGCGTCGATTCCTGACTTTACAACGGGAGCAATTGTA
GGAACAGTATTTGCTGTTTTATCTGGTCAAGATGCGGAATTTGCGATTGGACTTGCAATTCCAGTGGGGCTTTTAATGGT
TCAATTAGACATTTTAGCAAGATTTACAAATACATTTTTCTTACATCGGATTGATTCTAATATCGCTTCGGGCAACATTT
CGGCGGTAAAAAGGAACATTTGGTATGGGGCGCTACCATGGGCTTTATCACGCGCGGTTCCCGTATTTATCATGTTGACT
TTCGGACAAAGCGTGGTTGATTTTATTCTAAATGAAATTCCAGAATGGCTAATGGGCGGTCTTCGTGTAGCTGGGGGAAT
TCTTCCAGTAGTTGGTATCGCGATTCTTCTTCGTTATTTGCCAACAAACAAATTCGTCGCCTATTTAATTATCGGTTTTG
TAGCAGCGGCTTATTTAAAAGTACCAATGCTAGGTGTGGCGCTAATTGGCGTGGCTTTGGCAATCATTTACTTCAAACAA
AATTTCAAAAATCCAGTGGCTGCCGGAGCAAATGGTGCAGCGCTAGTTGGGGAGGAGAATGAAGATGGCGAATACGAAGA
CTGA

Protein sequence :
MDLAVWQIILLVILAACTILDALTLVIGLNFPVITGTLAGIIMGDMVLGLAIGATLQLMVLGVGTYGGASIPDFTTGAIV
GTVFAVLSGQDAEFAIGLAIPVGLLMVQLDILARFTNTFFLHRIDSNIASGNISAVKRNIWYGALPWALSRAVPVFIMLT
FGQSVVDFILNEIPEWLMGGLRVAGGILPVVGIAILLRYLPTNKFVAYLIIGFVAAAYLKVPMLGVALIGVALAIIYFKQ
NFKNPVAAGANGAALVGEENEDGEYED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0078 AAM75282.1 EF0078 Not tested Not named Protein 9e-44 41
EF0552 NP_814322.1 PTS system transporter subunit IIC Not tested Not named Protein 1e-43 41