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Name : lin2101 (lin2101) Accession : NP_471435.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Unknown Product : pyrimidine-nucleoside phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.2 Position : 2117991 - 2119292 bp Length : 1302 bp Strand : - Note : similar to pyrimidine-nucleoside phosphorylase; Catalyzes the reversible phosphorolysis of pyrimidines in the nucleotide synthesis salvage pathway DNA sequence : ATGAGAATGGTGGATATTATTTCCAAGAAGAGGGACGGCAAAGCTTTATCAACAGAAGAAATTCAGTTTTTCATTGATGG CTATACAAATGGGGAAATTCCAGATTATCAAGCAAGTGCTCTAGCCATGGCAATCTTTTTCCAAGATATGAACGATCAAG AACGCGCAGATTTAACAATGGCAATGGTAGGATCTGGCGACACGATTGATCTATCTGCAATCGAGGGCATCAAAGTCGAC AAACATAGTACTGGTGGCGTTGGTGATACAACAACACTTGTCCTTGCTCCACTTGTAGCAGCAGTAGGTGTTCCAGTTGC CAAAATGTCTGGACGCGGCCTAGGTCACACTGGAGGCACTATTGATAAATTAGAATCCATCGAAGGTTTCCATATTGAAC TAGATAAAAAAGATTTCATTAACTTAGTAAATCGCGACAAAGTAGCTGTTATTGGTCAATCAGGTAACCTTACTCCAGCT GATAAAAAAATGTACGCGCTTCGTGATGTAACAGGAACCGTGAACTCTATTCCACTCATTGCAAGCTCCATTATGAGTAA AAAAATCGCAGCCGGCGCAGATGCAATCGTACTTGATGTAAAAACCGGTGCTGGTGCGTTTATGAAAACCGACGAAGATG CAGAAAACCTAGCACATGCAATGGTTCGCATCGGTAATAACGTTGGTAGAAATACAATGGCAGTTATTTCTGATATGTCT CAACCACTTGGTGAAGCAATCGGAAACGCTTTAGAAGTAAAAGAAGCTATTGATACATTAAAAGGTCAAGGTCCAGAAGA CTTAACTGAATTAGTTCTCGTACTCGGAAGTCAAATGGTCGTACTTGCTAAACAAGCTGAAACCTTAGATGAAGCTCGCG CCAAACTAATCGAAGTAATCGAAAACGGAGCAGCACTAGAGAAATTCAAAACCTTCCTTTCTAATCAAGGCGGCGATGCA AGTATTGTTGACCACCCAGAAAAACTCCCACAAGCAAAATACCAAATCGAAGTACCCGCTAAAACATCCGGTTTCGTAAG CCAAATCGTTGCTGATGAAATTGGAATCGCAGCAATGATTCTAGGCGCCGGTCGTGCAACAAAAGAAGACGAAATCAACC TAGCAGTAGGTTTAATGCTACGCAAAAAAGTAGGCGATCAAGTCAAAGAAGGCGATTCACTCGTAACGATTTTTGCCGAC CAAGAAGACGTAGAAAATGTAAAAGCAAAAATCTACGAAAACATCAAAATCGCTGACCAAGCAACAGCACCAACACTCAT TCATAAAATTATTACAGAATAA Protein sequence : MRMVDIISKKRDGKALSTEEIQFFIDGYTNGEIPDYQASALAMAIFFQDMNDQERADLTMAMVGSGDTIDLSAIEGIKVD KHSTGGVGDTTTLVLAPLVAAVGVPVAKMSGRGLGHTGGTIDKLESIEGFHIELDKKDFINLVNRDKVAVIGQSGNLTPA DKKMYALRDVTGTVNSIPLIASSIMSKKIAAGADAIVLDVKTGAGAFMKTDEDAENLAHAMVRIGNNVGRNTMAVISDMS QPLGEAIGNALEVKEAIDTLKGQGPEDLTELVLVLGSQMVVLAKQAETLDEARAKLIEVIENGAALEKFKTFLSNQGGDA SIVDHPEKLPQAKYQIEVPAKTSGFVSQIVADEIGIAAMILGAGRATKEDEINLAVGLMLRKKVGDQVKEGDSLVTIFAD QEDVENVKAKIYENIKIADQATAPTLIHKIITE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 4e-70 | 47 |
