|
Name : lin1962 (lin1962) Accession : NP_471296.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1108 EC number : - Position : 1979151 - 1979993 bp Length : 843 bp Strand : - Note : similar metal cations ABC transporter (permease protein) DNA sequence : ATGCTGTTTTTAGAAGGATTAATGCAATATGGTTTTTTACAAAAAGCGCTTATTACTTCCGTGACAGTTGGTATTGTATC AGGTGTAATTGGTAGTTTTATCATTTTGCGAGGAATGTCGTTAATGGGTGATGCGATCTCTCATGCGGTGTTACCTGGTG TAGCAATTTCTTATATGATGGGGATGAACTTCTTCATAGGTGCAGCAACATTCGGCATTGCAGCAGCACTTGGCATCGGC TTTGTTAATCAAAAAAGTCGGATTAAAAATGATACAGCAATCGGCATCGTGTTTAGTGCATTTTTCGCGCTCGGGATTAT TTTAATTTCATTTGCGAAGAGTAGTACCGATTTGTACCATATCTTATTCGGAAATGTGCTTGCGGTGCGGAGTTCGGATA TGTGGATGACAATTATTATCGCGATACTGGTTATTTCGCTAGTCGCAATATTTTATAAAGAATTTCTAGTAAGCTCATTT GATCCTGTGATGGCAGAAGCATACGGTTTAAATGTGCGGTTCTTACACTACTTCTTAATGCTACTGCTGACACTTGTGAC GGTTTCGGCCTTACAAACAGTTGGAATTATCTTAGTAGTGGCAATGTTAATTACACCAGCTGCAACAGCGTATCTCCTCA CAAATAAATTATCTAAAATGATTATGCTCGCTTCCACATTTGGCGCAGTGAGTGCAATTATTGGACTTTATTTCAGTTAC ATTTTCAACTTAGCATCAGGTGCGGCAATGGTATTAGTTGCAACAATTATTTTCTTTATTGCCTTTTTATTCGCACCAAA ACAAGGATTATTGTTTTCTAAAAAGAAGGAGGTTATCGAATGA Protein sequence : MLFLEGLMQYGFLQKALITSVTVGIVSGVIGSFIILRGMSLMGDAISHAVLPGVAISYMMGMNFFIGAATFGIAAALGIG FVNQKSRIKNDTAIGIVFSAFFALGIILISFAKSSTDLYHILFGNVLAVRSSDMWMTIIIAILVISLVAIFYKEFLVSSF DPVMAEAYGLNVRFLHYFLMLLLTLVTVSALQTVGIILVVAMLITPAATAYLLTNKLSKMIMLASTFGAVSAIIGLYFSY IFNLASGAAMVLVATIIFFIAFLFAPKQGLLFSKKKEVIE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0576 | NP_814341.1 | cation ABC transporter permease | Not tested | Not named | Protein | 3e-46 | 62 |
| ef0094 | AAM75297.1 | EF0094 | Not tested | Not named | Protein | 3e-46 | 62 |
