Gene Information

Name : lin1921 (lin1921)
Accession : NP_471255.1
Strain : Listeria innocua Clip11262
Genome accession: NC_003212
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1935770 - 1936513 bp
Length : 744 bp
Strand : -
Note : similar to 3-ketoacyl-acyl carrier protein reductase

DNA sequence : 
ATGACTTTACAAGGCAAAGTAGCAGTAGTAACAGGTGGATCGCGCGGAATCGGTCGTGACATCGCCATCAAATTAGCTAA
AGAAGGCGCAAATATTTTCTTCAATTACAATGGTAGCCCAGAAGCTGCGGAAGAAACAGCAAAACTCGTTGCCGAACATG
GTGTAGAAGTAGAAGCAATGAAAGCAAACGTAGCGATTGCTGAAGATGTGGATGCATTTTTCAAACAAGCAATCGAGCGC
TTTGGTCGTATCGACATTTTAGTCAATAATGCGGGAATTACGCGTGATAATTTATTAATGCGAATGAAAGAAGACGAGTG
GGATGACGTTATTAACATCAACCTAAAAGGAACTTTCCTTTGTACAAAAGCAGTAAGTCGTACAATGATGAAACAACGCG
CTGGTAAAATTATCAACATGGCTTCTGTTGTTGGCTTAATTGGTAATGCGGGTCAAGCAAACTATGTTGCAAGTAAAGCA
GGCGTAATTGGTTTAACAAAAACAACTGCTCGTGAACTTGCTCCACGTGGTATTAACGTTAATGCTGTTGCTCCTGGTTT
CATTACAACAGAAATGACAGACAAATTAGATGATAAAACAAAAGAAGCAATGCTAGCTCAAATTCCGCTTGGTGCTTACG
GAACAACCGAAGATATTGCGAATGCAGTTCTTTTCTTAGCAAGCGATGCATCGAAGTATATTACTGGCCAAACACTATCC
GTTGATGGCGGAATGGTAATGTAA

Protein sequence : 
MTLQGKVAVVTGGSRGIGRDIAIKLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVEAMKANVAIAEDVDAFFKQAIER
FGRIDILVNNAGITRDNLLMRMKEDEWDDVININLKGTFLCTKAVSRTMMKQRAGKIINMASVVGLIGNAGQANYVASKA
GVIGLTKTTARELAPRGINVNAVAPGFITTEMTDKLDDKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYITGQTLS
VDGGMVM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 1e-37 44
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 1e-37 44
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 5e-38 44
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 5e-38 44
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 5e-39 43