|
Name : rplS (lin1901) Accession : NP_471235.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 1916347 - 1916691 bp Length : 345 bp Strand : - Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGAACAAACTGATTGATGAAATCACAAAAAGTCAACTAAACCCAGATGTTCCAAGTTTCCGTCCGGGTGATACTGTACG TGTACATGCGAAAGTAGTCGAAGGTACTCGCGAACGTATCCAATTATTCGAAGGCGTTGTAATCAAACGTCGCGGAGCTG GAATCAGCGAAACTTTCACTGTTCGTAAAATTTCTAACGGTGTTGGTGTGGAACGTACTTTCCCAGTACATACTCCACGT ATCGCGAAATTAGAAGTTATCCGTCGTGGTAAAGTACGTCGTGCGAAACTTTACTACCTACGTAACCTACGTGGTAAAGC GGCTCGTATTAAAGAAATTCGTTAA Protein sequence : MNKLIDEITKSQLNPDVPSFRPGDTVRVHAKVVEGTRERIQLFEGVVIKRRGAGISETFTVRKISNGVGVERTFPVHTPR IAKLEVIRRGKVRRAKLYYLRNLRGKAARIKEIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 2e-48 | 99 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 9e-28 | 59 |
