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Name : polA (lin1600) Accession : NP_470936.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : - Position : 1606292 - 1608919 bp Length : 2628 bp Strand : - Note : has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair DNA sequence : GTGAATAAATTAGTTTTAATTGATGGAAATAGTATTGCGAATCGCGCGTTTTATGCGTTGCCGCTCTTAAATAATGATAA AGGCGTATATACAAATGCGGTGTACGGATTTGCAATGATGCTGATGAACGTACTTGAAAAAGAAAAGCCTAGTCATGTGC TCGTTGCTTTTGATGCAGGAAAAACAACCTTCCGCCACACTACATTTAAAGGATATAAAGGTGGTCGCCAAAAAACGCCA AGTGAATTATCCGAGCAATTTCCATTTATCCGAGAGCTCTTAACAGCTTACGATATCCCGCAATATGAACTTGCTAACTA CGAGGCCGATGATATTATCGGGACGTTAACGAAAAAAGCAGAAGCAGACGGAATGGAAGTCGCTATCATAACAGGAGACC GCGATTTAACTCAACTTGCTTCTCGGAAAACCACTGTTTATATTACTAAAAAAGGTATAGCTGATATGGAAACAAACACT CCAGAAACCTTAAAAGAAAAATATGACTTAACACCATCGCAAATCATTGATATGAAAGGTTTAATGGGAGATTCATCTGA TAATATTCCCGGCATTCCTGGCGTAGGTGAAAAAACAGCCTTGAAACTTTTGCATGAATTTGGCGGTACAGTTGAAAGTG TCCTTGAACATGCTGAAGAAATTTCAGGTAAAAAATTAAAAGAAAAAGTACTAGAAAATAAAGAATTAGCTATTTTAAGT AAAGAACTTGCGACAATCAATGTAGATTCACCAATTGAATGTACAGTCGAAAGTACGAAATATGATGGCTATCAAACAGA AAAAGTCATCCCACTATTAAAAGAAATGAACTTCACAACGCTTTTAAAAAACATCGAAGGAGATACAGCGGAAGAAGCAA AAGAATTAAAAGAACTATCTTTTGAAATAGTAACGGAATTAAAAGAACAACACTTTGGCGGGAAAACCGCGCTTTATGTG GAACTGGAAAATGATAATTATCATACCGCAAACTTTATTGGATTAACCGTTCATTCTAGCCAAGGGACATACTTCTTTAC GAAGGAAACTGCAGAAAAAAGTGCGGTTTTCCGTAATTGGGTGGAAAGTGACGAAACAAAAGTCGTTTATGATGCGAAAA AAACAATGGTAGCGATGAACCGAATTGGTTTTGCTATAAAAGGTGTCACTTTTGATATTATGTTAGCTTCTTATTTACTA AATCCATCAGATTCCATTGATGACTTTACAAGTGTTGCTGTGAGACATGATTATACAGAAGTAGAAACAGACGAAGCAAT TTATGGAAAAGGTGCTAAACGAAGCACGCCGGAAGAGAACATTGTTGCTGCCCACTTAGCCAGAAAAGCAGTAGCAATTG CTGAATTAGAGAAAAGATTAGTAGATGATTTAGAGGAAAATGAGCAATTAGCTTTGATGGAAGATTTAGAGTTACCACTG ACATTTGTCTTGGCACAAATGGAAATGCAAGGGGTTAGCGTAGATACAAAACGCTTAGAAAATATGAAAGTAGAATTAGC TGGTAGATTGAAAACATTAGAAGAATCGATTCATTCACTAGCTGGCGAAGAATTTAACATCAATTCACCAAAACAATTAG GTGTCATTTTATTTGAAAAACTAGAACTTCCTCCAGTGAAAAAAACCAAGACTGGTTATTCAACCGCAGCGGATGTACTA GAGAGCTTATCAGGAAAACATGCGATTATTGATGAAATTTTATTATATCGTCAACTTGGTAAAATTCAATCTACCTACAT TGAAGGCTTGCTTAAAGTAACTGACAAAGAAACGCATAAAGTACACACGCGTTTCAACCAAACGTTAACGCAAACTGGTC GTTTAAGTTCTGTTGATCCGAACTTACAAAACATCCCGATTCGACTTGAAGAAGGCCGGAAAATCAGACAAGTTTTCGTA CCAAGTAAACCTGGTTGGAAAATGTTTTCCGCCGATTACTCCCAAGTAGAATTGCGTGTTTTAGCGCATATTTCTGAAGA CGAGAATTTAATTTATGCGTTTAAACACGACTATGATATTCATACAAAAACAGCGATGGATGTTTTCCATGTAGAACAAG ATGAAGTTGATTCTTTAATGCGTCGTCAAGCCAAAGCAGTAAACTTTGGAATCGTATACGGCATTAGTGATTATGGGCTT TCTCAAAACCTTGGTATCACGAGAAAAGAAGCGAAAGACTTTATTGATCGTTATTTTGTGAGTTATCCAGCTGTAAAAGA ATATATGCAAGATATTGTTCGTTTTGCGAAAGAAAAAGGCTACGTAGAAACTATTTTACATCGTCGTCGGTATATTCCGG AAATCGTCAGCCGCAATTTCAATGTAAGAGGATTTGCGGAAAGAACGGCAATGAATACACCTATTCAGGGTAGTGCCGCG GATATTATAAAAAAAGCAATGATTCTCATGAGCGAACGCTTAAAATCTGAGAATTTAGAAGCAAAATTATTACTTCAAGT GCACGATGAGCTTATCTTTGAAGCACCTGAAGCAGAAATTGCAAAATTAGAAGAGATTGTACCTGATGTAATGGAAAATG CGGTAGAACTTTCTGTGCCACTTAAAGTTGATAGCGCATTTGGCGACACTTGGTATGATGCGAAATAA Protein sequence : MNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKPSHVLVAFDAGKTTFRHTTFKGYKGGRQKTP SELSEQFPFIRELLTAYDIPQYELANYEADDIIGTLTKKAEADGMEVAIITGDRDLTQLASRKTTVYITKKGIADMETNT PETLKEKYDLTPSQIIDMKGLMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESVLEHAEEISGKKLKEKVLENKELAILS KELATINVDSPIECTVESTKYDGYQTEKVIPLLKEMNFTTLLKNIEGDTAEEAKELKELSFEIVTELKEQHFGGKTALYV ELENDNYHTANFIGLTVHSSQGTYFFTKETAEKSAVFRNWVESDETKVVYDAKKTMVAMNRIGFAIKGVTFDIMLASYLL NPSDSIDDFTSVAVRHDYTEVETDEAIYGKGAKRSTPEENIVAAHLARKAVAIAELEKRLVDDLEENEQLALMEDLELPL TFVLAQMEMQGVSVDTKRLENMKVELAGRLKTLEESIHSLAGEEFNINSPKQLGVILFEKLELPPVKKTKTGYSTAADVL ESLSGKHAIIDEILLYRQLGKIQSTYIEGLLKVTDKETHKVHTRFNQTLTQTGRLSSVDPNLQNIPIRLEEGRKIRQVFV PSKPGWKMFSADYSQVELRVLAHISEDENLIYAFKHDYDIHTKTAMDVFHVEQDEVDSLMRRQAKAVNFGIVYGISDYGL SQNLGITRKEAKDFIDRYFVSYPAVKEYMQDIVRFAKEKGYVETILHRRRYIPEIVSRNFNVRGFAERTAMNTPIQGSAA DIIKKAMILMSERLKSENLEAKLLLQVHDELIFEAPEAEIAKLEEIVPDVMENAVELSVPLKVDSAFGDTWYDAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 0.0 | 49 |
