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Name : lin1472 (lin1472) Accession : NP_470808.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : - Position : 1472272 - 1473612 bp Length : 1341 bp Strand : - Note : similar to glutathione reductase DNA sequence : TTGACAGAATTTACATATGATGTAGTTATAATCGGAAGTGGTGCTAGTGGAACAACCGTGGCTTTTGAAGCGCAGGCAGC CGGTCTAAAAGTAGCGATTGTGGAAGAGCGTAGTTGGGGCGGCACATGTGTCCTTAGAGGCTGTGACCCTAAAAAAGTGT TAGTCGGAGCAGCAGAAGCAAGAAATCTTTCCACAAGATTACGTGGTAAAGGTATTAAAGAAGCAGCAACAATTAGCTGG ACAGATTTAATGGCATTCAAAGAAACATTTGTAGAAGATGTGCCTGAAAGTCGCTTGGAAAGTTTTCAAGAAGCTGGGAT TGAAACGTTTTTCGGACCAGCAAGTTTTCAAAACGAAAATACTTTGCAAGTTGGTAACGACATACTAAGTGCTAAAAAAA TAGTGATTGCAACCGGCGCAACACCAAATACACTTAAAGTAGAAGGTCAAGAACATATTCAAACGAGTGATGATTTCTTA TCACTTGAAAAACTTCCAGATTCGGTTGTTTTTATCGGCGGTGGTTATATTTCTTTTGAATTTGCATCAATTGCGCTAGC TGCAGGGCGAGATGTGCATATAATTCATCATAATAGCGAACCATTAAAGAAATTCGATCCCGATTTTGTAGCTGCCTTAG TTGCTACACTAAAAGAAGAAGGCATTCATTTCCATTTTGATACTGATATTACTAAAATTAATAAAAATGGTGAAAAACTT CATATCGAAGGTAAAAATGGCTTTTCACTTGAAACCGACTTAATTATCGGAGCAACCGGAAGGACGCCCAATATTGCTCA TTTAGCTCTAGATAAAGCAAACATAGACTATACCAAAAAAGGCATTACAGTAAACGAGAAACTACAAACACCTAACCACC CACATATTTATGCATGTGGTGATGTAGCCGCTACAAAAGGCGCTCCGTTAACACCAGTTGTCAGTATGGAAGCAGCATTA GTAGCAAAAAATATTTTAGGCGGCAATGAAAAAATCGATTATCCTGCCATACCAAGCGTTGTTTTTACTAGTCCAAAACT TGCAAGCATTGGCATAAGCATGGAAGAAGCAAACGCCAATCCAGAAAAATATCAAATTAAAAACCATGATACAACGAACT GGTATACGTACAGAAGAACGAACGAAAAAATCGCCCTCGCAAAAATCATAGAAGACCGCGAAACTGGTCAAATTAAAGGC GCTCACTTCCTAAGTGAAGAGGCTGATTATATGATAAATTATATCGCTATCCTAATGAAAGCTAACTTAACTTTGGCTGA TTTACAGTCTGTCATATTTGCATATCCATCACCTGCAAGTGATTTAACTGCTTTGAACTAG Protein sequence : MTEFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERSWGGTCVLRGCDPKKVLVGAAEARNLSTRLRGKGIKEAATISW TDLMAFKETFVEDVPESRLESFQEAGIETFFGPASFQNENTLQVGNDILSAKKIVIATGATPNTLKVEGQEHIQTSDDFL SLEKLPDSVVFIGGGYISFEFASIALAAGRDVHIIHHNSEPLKKFDPDFVAALVATLKEEGIHFHFDTDITKINKNGEKL HIEGKNGFSLETDLIIGATGRTPNIAHLALDKANIDYTKKGITVNEKLQTPNHPHIYACGDVAATKGAPLTPVVSMEAAL VAKNILGGNEKIDYPAIPSVVFTSPKLASIGISMEEANANPEKYQIKNHDTTNWYTYRRTNEKIALAKIIEDRETGQIKG AHFLSEEADYMINYIAILMKANLTLADLQSVIFAYPSPASDLTALN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| merR | BAB47647.1 | regulatory protein | Not tested | Type-III SCCmec | Protein | 3e-95 | 45 |
| SE0080 | NP_763635.1 | regulatory protein | Not tested | SCCpbp4 | Protein | 5e-95 | 45 |
