Gene Information

Name : lin1460 (lin1460)
Accession : NP_470796.1
Strain : Listeria innocua Clip11262
Genome accession: NC_003212
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : -
Position : 1459876 - 1460859 bp
Length : 984 bp
Strand : +
Note : similar to glycine betaine/carnitine/choline ABC transporter (ATP-binding protein)

DNA sequence : 
ATGATTCGTTTTGATAATGTATCCAAAAAGTACAGCGATGATAAGACAGCAGTGAATAATGTTACTTTGGACATAAAAGA
CGGCGAGTTCTTTGTTTTCATCGGACCTAGTGGTTGCGGGAAAACGACAACGTTAAAAATGATTAATCGCTTGATTCCAC
TTACAACTGGAACCATTTATATTAATGAAAAGCGTATTAGTGATTATGATATTCATGAACTCCGCTGGGATATTGGCTAT
GTCTTACAGCAAATAGCACTTTTTCCTCACATGACAATTGAAGAAAATATCGCTATTGTTCCAGAGTTAAAGAAATGGAG
TAAAGAAAAAATCCATGATCGAATTACCGAATTGCTTGATAGCGTTGGTTTAGATGCGGAAAGTTATCGCCATCGTAAGC
CAGCTGAATTATCTGGCGGAGAGCAGCAGCGTGTTGGTGTTGTTCGCGCACTTGCGGCCGATCCAGGAATAATTTTAATG
GATGAGCCTTTTAGCGCGCTTGATCCTATTTCACGCCAACGTTTACAACAAGACATTTCCACACTTCAAAAGAAAATCAA
GAAAACAATCGTATTTGTTACCCATGATATGCAAGAAGCTCTAGCACTGGGAGACCGTATTTGTGTCATGCAAGATGGCG
AAATTGTCCAAGTCGCTACTCCACAAGAAATTGTAAAAAATCCTGAAAATGATTTTGTTAAAGATTTCTTAGCTTCTGGT
CACGCGTTCAATACACCGATTTTAGAATCGAGTTTTACAGTAAATGATTTAATAGAGGCTGATTTGTTTTACGCCTATCA
AGCTAGTGACGGGACGATGGGAATTTCCTCGAACGAACGAGTTGAAAATCTAGTTCGCCGCATTGCCGAAGAACAATCGG
TTCCAGTTAAAGATGAAACCGGTCAGTTTATCGGTACGATTACTAATAAACATGTGATGCAATTTTTAGCGCGTCATCTT
GAAAGTTCGGGTGAGCTTGTATGA

Protein sequence : 
MIRFDNVSKKYSDDKTAVNNVTLDIKDGEFFVFIGPSGCGKTTTLKMINRLIPLTTGTIYINEKRISDYDIHELRWDIGY
VLQQIALFPHMTIEENIAIVPELKKWSKEKIHDRITELLDSVGLDAESYRHRKPAELSGGEQQRVGVVRALAADPGIILM
DEPFSALDPISRQRLQQDISTLQKKIKKTIVFVTHDMQEALALGDRICVMQDGEIVQVATPQEIVKNPENDFVKDFLASG
HAFNTPILESSFTVNDLIEADLFYAYQASDGTMGISSNERVENLVRRIAEEQSVPVKDETGQFIGTITNKHVMQFLARHL
ESSGELV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 6e-50 48
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-50 48