|
Name : tcsA (lin1425) Accession : NP_470761.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Unknown Product : CD4+ T cell-stimulating antigen, lipoprotein Function : - COG functional category : R : General function prediction only COG ID : COG1744 EC number : - Position : 1420555 - 1421628 bp Length : 1074 bp Strand : + Note : - DNA sequence : GTGAAAAAGCGTACATTTGCTTTAGCACTATCAATGATTATTGCTTCTGGCGTTGTCTTAGGTGCTTGTGGTTCGAGCAG CGACGATAAAAAAAGTGGCGATGATAAGAGCAGTAAAGATTTTACAGTAGCTATGGTTACAGATACTGGTGGCGTTGATG ACCGTTCATTTAACCAATCAGCATGGGAAGGCTTACAAAAATTTGGTAAAGCTAACGACATGGAAAAAGGTACAGACGGT TATAACTATTTGCAATCAGCTTCTGAAGCAGACTACAAAACAAACTTAAACACTGCTGTTCGTAGCGACTATGATTTGAT TTATGGAATTGGTTACAAACTGAAAGATGCAATTGAAGAAGTTTCTAAACAAAAACCTAAAAATCAATTCGCTATTGTTG ATGACACAATTGATGACCGTGATAATGTAGTAAGTATTGGATTTAAAGATAACGATGGTTCTTACCTAGTTGGTGTTGTA GCCGGCTTAACAACAAAAACAAATAAAGTTGGATTTGTTGGTGGGGTAAAAGGAGCTGTTATCGACCGTTTTGAAGCTGG TTTCACTGCTGGTGTAAAAGCTGTTAATCCTAACGCACAAATTGATGTACAATATGCAAACGATTTCGCAAAAGCAGACA AAGGACAACAAATTGCTTCTTCCATGTATTCAAGTGGAGTTGACGTAATTTTCCATGCTGCTGGCGGTACTGGTAACGGT GTCTTTGCAGAAGCTAAAAACCTGAAGAAAAAAGATCCTAGCCGTGCTGTTTGGGTAATCGGTGTTGACCGTGACCAATG GGACGAAGGAAAAGTTACAGCAAACGATGGCAAAGATTACAATGTAACACTTACATCTGAAATCAAACGCGTTGATATCG CTGTAGATGACCTTGCAACTCGTACTAAAGCTGGAGATTTCCCTGGCGGAACTAAAATTGAATATGGTCTTGATAAAGAT GCTGTAGGGCTTTCTGAACATCAAGATAATATTTCTAAAGACGTTTTAGCTAAAGTAGAAGAATACAAACAAAAAATCGT TGATGGGGACATTAAAGTTCCAGAAAAACCTTGA Protein sequence : MKKRTFALALSMIIASGVVLGACGSSSDDKKSGDDKSSKDFTVAMVTDTGGVDDRSFNQSAWEGLQKFGKANDMEKGTDG YNYLQSASEADYKTNLNTAVRSDYDLIYGIGYKLKDAIEEVSKQKPKNQFAIVDDTIDDRDNVVSIGFKDNDGSYLVGVV AGLTTKTNKVGFVGGVKGAVIDRFEAGFTAGVKAVNPNAQIDVQYANDFAKADKGQQIASSMYSSGVDVIFHAAGGTGNG VFAEAKNLKKKDPSRAVWVIGVDRDQWDEGKVTANDGKDYNVTLTSEIKRVDIAVDDLATRTKAGDFPGGTKIEYGLDKD AVGLSEHQDNISKDVLAKVEEYKQKIVDGDIKVPEKP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| M5005_Spy_0137 | YP_281501.1 | nucleoside-binding protein | Not tested | Not named | Protein | 2e-64 | 48 |
