|
Name : lin1346 (lin1346) Accession : NP_470682.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : K : Transcription COG ID : COG1475 EC number : - Position : 1342687 - 1343193 bp Length : 507 bp Strand : - Note : similar to Escherichia coli YbdM protein DNA sequence : ATGAATTATAAAAGCCCAGTATACAACGTCACTCCCATTCACTACACCAAACTTCAAGCAAATAATTATAATCCAAATAC CGTTCCAGCCACGGAACTAAAACTACTAGAAAAATCTATTTGGGAAGATGGATTTACACAACCAATCGTTTGCTATCCCT TGGAAAACTCTGATAAATATGAAATAATAGACGGGTTTCATCGATATACTATCATGCAGACTTCTAAACGGATCCGCGAA AGAGAAAAAGAATTATTACCAGTAGTTATTTTAGAAAAAGATACCGTAAACCGGATAGCTTCTACTATTCGTCATAATCG TGCTCGCGGTTTTCATAACGTAGAGCTTATGTCTTCTATTGTTGGTGAATTAGCAGATAGCGGCATGTCAGACAGCTGGA TTATGAAAAATATTGGAATGGATGCAAATGAAATCTTACGCTTAAAACAAGTGAGCGGCCTTACTCACCTCTTCTTAGAT AAAGAATTCAGTAAAGCTTCTGATTAA Protein sequence : MNYKSPVYNVTPIHYTKLQANNYNPNTVPATELKLLEKSIWEDGFTQPIVCYPLENSDKYEIIDGFHRYTIMQTSKRIRE REKELLPVVILEKDTVNRIASTIRHNRARGFHNVELMSSIVGELADSGMSDSWIMKNIGMDANEILRLKQVSGLTHLFLD KEFSKASD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| M5005_Spy_0164 | YP_281528.1 | parB-like nuclease | Not tested | Not named | Protein | 3e-40 | 54 |
| ef0120 | AAM75321.1 | EF0120 | Not tested | Not named | Protein | 5e-31 | 50 |
| EF0607 | NP_814365.1 | ParB-like nuclease domain-containing protein | Not tested | Not named | Protein | 7e-31 | 50 |
| ibrB | ADD91736.1 | predicted transcriptional regulator IbrB | Not tested | PAI-I AL862 | Protein | 2e-23 | 48 |
| Z1644 | AAQ19140.1 | putative ParB-like nuclease | Not tested | PAI I CL3 | Protein | 2e-23 | 48 |
| z1204 | CAD33764.1 | Z1204 protein | Not tested | PAI I 536 | Protein | 5e-24 | 48 |
| STY4584 | NP_458668.1 | conserved hypothetical protein | Not tested | SPI-7 | Protein | 2e-24 | 47 |
| t4278 | NP_807876.2 | hypothetical protein | Not tested | SPI-7 | Protein | 2e-24 | 47 |
| Z1204 | NP_286739.1 | hypothetical protein | Not tested | TAI | Protein | 5e-23 | 47 |
| Z1644 | NP_287147.1 | hypothetical protein | Not tested | TAI | Protein | 5e-23 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lin1346 | NP_470682.1 | hypothetical protein | VFG1505 | Protein | 2e-24 | 48 |
