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Name : hslU (lin1318) Accession : NP_470654.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 1312583 - 1313992 bp Length : 1410 bp Strand : + Note : highly similar to ATP-dependent Clp protease-like proteins; heat shock protein involved in degradation of misfolded proteins DNA sequence : TTGACAAATTTAACGTTAATGAACCAGTTGACACCAAAGCAAATTGTCGAAAAACTGGATCAATATATTATTGGACAAAC CGGAGCGAAAAAATCAGTTGCTGTAGCACTAAGAAACCGCTATCGTAGACAACTGATGGATGAATCTATCCGAGATGAAA TTATTCCAAAAAATATTCTGATGATTGGCCCAACTGGGGTAGGTAAAACAGAAATTGCACGCCGAATTGCAAAAATCGTT CGCGCACCTTTTTCAAAAGTAGAGGCTACTAAATTTACTGAAGTCGGCTATGTTGGACGCGACGTGGAATCAATGGTTCG CGATTTAGTTGAAGTGTCAGTACGTTTAGTAAAAGAAGAAAAAATGCAATTAGTACGTGTGAAAGCTGAAAAAAATGCCG AAAAACGACTAATTAAATTACTAGCACCAAGTCAAAAGAAAAAGCAAACAACATCACAAAATCCACTAGAGGCGCTTTTT GGCAGTATGAATCAACCTGATGAACCTGCTGAGGAAGAAGTAGACCAAGAATTAAAGAATAAAAGAAGCCAAATTGAATG GCGCCTTCAAAACGGAGAGCTTGATGATGAAATAGTAACAGTTGAAGTAAAAGAGCAACAAAACCCGATGTTTGATATGA TGCGTGGAACTGGAATGGACCAAATGAGCGGCATGCAAGATGCTCTTTCAGGTATGTTCCCAGCGAAGAAGAAAAAACGC AAAGTAACCGTTCGTGAAGCGAAGAAAATTCTTTTTGAGGATGAAGCATCTAAATTGATTGATTCAGATGAACTCGCAGC AGAAGGAATTCATCGCGCAGAGCAAATGGGTATGATTTTCATTGATGAAATTGATAAAATCGCTAGTAAAGAAGGCGGCG GAAATGCGCAAGTTTCCCGTGAAGGTGTTCAAAGAGACATTCTTCCAATCGTTGAGGGGTCGCAAATTTCTACCAAATAT GGTACAGTCAACACGGAGTACATTTTATTCATTGCCGCTGGAGCTTTTCATATGTCTAAACCAAGTGATTTAATTCCAGA GCTTCAAGGTCGTTTTCCAATTAGAATTGAGCTGGATAAGTTAACACAAGAAGATTTCTACAAAATCTTAACAGAACCAG ACAATGCGCTAATTAAACAATACAAAGCTTTACTCAAAACAGAAGGAATAGACTTGATTTTTACAAAAGAAGCTGTAGAA AGAATCGCTGAGATTGCATTCCAAGTTAATCAAGATTCAGATAATATCGGAGCAAGAAGACTTCATACCATTTTAGAAAA ATTACTAGAGGATTTACTTTTTGAAGCACCTGAAATTAATATGGAATCCATCAAAGTAACAGAAAACTATGTTAATGAAA AACTTGCGCCAATAATGACGAATAAAGACTTAACACAATTTATTTTATAA Protein sequence : MTNLTLMNQLTPKQIVEKLDQYIIGQTGAKKSVAVALRNRYRRQLMDESIRDEIIPKNILMIGPTGVGKTEIARRIAKIV RAPFSKVEATKFTEVGYVGRDVESMVRDLVEVSVRLVKEEKMQLVRVKAEKNAEKRLIKLLAPSQKKKQTTSQNPLEALF GSMNQPDEPAEEEVDQELKNKRSQIEWRLQNGELDDEIVTVEVKEQQNPMFDMMRGTGMDQMSGMQDALSGMFPAKKKKR KVTVREAKKILFEDEASKLIDSDELAAEGIHRAEQMGMIFIDEIDKIASKEGGGNAQVSREGVQRDILPIVEGSQISTKY GTVNTEYILFIAAGAFHMSKPSDLIPELQGRFPIRIELDKLTQEDFYKILTEPDNALIKQYKALLKTEGIDLIFTKEAVE RIAEIAFQVNQDSDNIGARRLHTILEKLLEDLLFEAPEINMESIKVTENYVNEKLAPIMTNKDLTQFIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 2e-97 | 49 |
