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Name : lin1317 (lin1317) Accession : NP_470653.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Unknown Product : ATP-dependent protease peptidase subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG5405 EC number : - Position : 1312030 - 1312569 bp Length : 540 bp Strand : + Note : highly similar to beta-type subunit of the 20S proteasome; heat shock protein involved in degradation of misfolded proteins DNA sequence : ATGGAATTACATGCTACTACAATTTTTGCCGTGCAGCACGATGGTAAAGCTGCGATGGCTGGGGACGGTCAAGTCACGCT CGGGGAATCGGTAGTAATGAAACACACTGCCAAAAAAGTTCGCCGCCTTTTTCATGATAAGGTAATAGCTGGTTTTGCTG GATCCGTTGCAGATGCCTTTACTTTATTTGAAAAATTCGAAGCAAAATTAAATGAATATAATGGAAACTTAGAAAGAGCT GCTGTGGAACTCGCGCAACAATGGCGAAGTGATAGTGTTCTACGTAAATTAGAAGCGATGTTGATCGTAATGGACAAAGA TACATTGTTGTTAGTTTCTGGAACAGGTGAAGTTATTGAACCAGATGATGGCATTTTAGCAATCGGTTCTGGTGGTAACT ATGCTCTAGCTGCTGGTAGAGCGTTAAAAAGACATAATGGCGGACAAATGGAAGCTAAAGACATAGCTCGTCATGCACTG GAAATCGCTTCTGAAATTTGTGTGTTTACGAATGACCATATTACAGTAGAAGAGCTTTGA Protein sequence : MELHATTIFAVQHDGKAAMAGDGQVTLGESVVMKHTAKKVRRLFHDKVIAGFAGSVADAFTLFEKFEAKLNEYNGNLERA AVELAQQWRSDSVLRKLEAMLIVMDKDTLLLVSGTGEVIEPDDGILAIGSGGNYALAAGRALKRHNGGQMEAKDIARHAL EIASEICVFTNDHITVEEL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslV | YP_003728752.1 | protein HslV | Not tested | cag PAI | Protein | 2e-35 | 48 |
