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Name : lin1222 (lin1222) Accession : NP_470559.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 1237078 - 1238724 bp Length : 1647 bp Strand : - Note : similar to alpha,alpha-phosphotrehalase DNA sequence : ATGACAAAGTTTGCTCAAAAAACTATTTATCAAGTGTATCCAAAATCTTTTTTTGATACGACTGGCGATGGTACTGGGGA TATTCCTGGTATCACCGCTAAGCTTGATTACTTACAGGAACTCGGAATTGAGATGATTTGGATTAATCCTTTTTATCCTT CTCCGCAAAATGATAACGGGTATGATATTTCTGATTATACGGCTGTAGACCCGTTATTTGGAACTATGAATGATGTTACT ACGCTTATTTCTGAAGCAAAGAAAAGAAATATCGGAATTATGATTGATTTAGTCTTAAATCATACTTCAACCGAACACCC TTGGTTTAAAAAAGCTCTCGCTGGTGACCCTTTTTATCGTGATTTTTATTATTTCCGTCCGGCAAAAGCAGATGGATCTC CGCCAACAAACTGGGAGTCTAAATTTGGCGGAAGTGCTTGGCAAAAGTTACCTAATTCATCTGAGTATTATTTGCATTTA TATGACGTTACTCAAGCTGATCTTGACTGGGCTAACAAAAATGTACGTGAAGCGCTTTTTGATGTGGTGAACTTTTGGAT TGATAAAGGTGTGGAAGGATTTCGTTTAGATGTGTTAAACGTTATTGCGAAACCTAAGTTTTTAGAAGATGATTTTGAAG GTGATGGTCGTCGTTTTTACACGGATGGGCCAGGCATTCACGCCTATTTAAAAGAGTTAAATGAGCGAACTTTTGGTGAT AAGCCGATTGTAACTGTTGGGGAGATGTCTTCTACTGATATTGATAATTGTATCCGTTATAGCGACCCGAAAGAAAAAGA ATTATCGATGGTATTTCATTTCCATCATTTAAAAGTGGATTATCCTGATGGGGAAAAATGGCGCTTAGCGGATGTGAATT TTGCTAATTTGAAATCGATTTTCCATACGTGGCAAGTCGCAATGTCTGAAGAGAATGGCTGGGATGCGCTTTTTTGGAAT AATCATGATCAACCTAGAGCGCTTGGGCGTTTTGCTTCTGATCGTCCGGAACATTATTATCACTCTGCCACCCTGCTTGG TGCGACAATTCATTTTATGCGTGGAACTCCCTTTGTATATATGGGAGAAGAAATTGGCATGATGAATCCAAAATTCCCTA CAATTGATGATTATGTCGATATTGAAACACTCAATCATTTTGACATCTTACACAAAAACGGGCTAAGTGAACAAGAAGTA ATGACTATTATTAAAGAACGTTCGCGTGATAATAGCCGGACACCAATGCAGTGGGATAGTTCGAACAATGCTGGGTTTAC GACCGGCACTCCTTGGTTAAAAGTAGCAGATAACGCCAATGAAATTAATGTTCAAAAAGCGCTATCCGATAAAACAAGCA TTTTCTACTTTTACCAAAAACTGATTGCTTTACGTAAAGAATATCCGGTCATTCAAACTGGTGATTATACGCCATATTTG ACCGAGGAAGATTCGATTATCGCCTATAAGCGTTCAAATGAAACTGCATCGCTACTAGCAATTCATTACTTTGGAGCTAC AAAGAAAAAAATACAGCTTCCAAAAGAATTTTCGGACGGAAAGATATTACTATCAAATTATGACCGTAAAGAAATTAGTG CTGAGATAGAGTTATCGCCTTATGAAACATTAACTTTAATTCAATAA Protein sequence : MTKFAQKTIYQVYPKSFFDTTGDGTGDIPGITAKLDYLQELGIEMIWINPFYPSPQNDNGYDISDYTAVDPLFGTMNDVT TLISEAKKRNIGIMIDLVLNHTSTEHPWFKKALAGDPFYRDFYYFRPAKADGSPPTNWESKFGGSAWQKLPNSSEYYLHL YDVTQADLDWANKNVREALFDVVNFWIDKGVEGFRLDVLNVIAKPKFLEDDFEGDGRRFYTDGPGIHAYLKELNERTFGD KPIVTVGEMSSTDIDNCIRYSDPKEKELSMVFHFHHLKVDYPDGEKWRLADVNFANLKSIFHTWQVAMSEENGWDALFWN NHDQPRALGRFASDRPEHYYHSATLLGATIHFMRGTPFVYMGEEIGMMNPKFPTIDDYVDIETLNHFDILHKNGLSEQEV MTIIKERSRDNSRTPMQWDSSNNAGFTTGTPWLKVADNANEINVQKALSDKTSIFYFYQKLIALRKEYPVIQTGDYTPYL TEEDSIIAYKRSNETASLLAIHYFGATKKKIQLPKEFSDGKILLSNYDRKEISAEIELSPYETLTLIQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 2e-109 | 43 |
