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Name : rph (lin1201) Accession : NP_470538.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 1215541 - 1216287 bp Length : 747 bp Strand : + Note : similar to ribonuclease PH; RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGAGATTTGATGGAAGAGAAAAGAATGCATTACGAGAAATCGAAGTAACACCTGATTACTTAATGCACCCAGAAGGTTC TGTTTTAATCGCATCAGGAAATACAAAAGTTATCTGTTCTGCAAGTGTAGAAACAAAAGTACCACCATTTATGCGCGGGG AAGGTCGTGGCTGGATTTCTGCTGAATATTCCATGTTACCACGGGCAACGAATACACGTAATATCCGCGAATCTTCTAAA GGAAAAGTAACTGGAAGAACAATGGAAATTCAACGTTTAATTGGACGGGCTTTACGTGCCGTGGTTGACTTAGACGCACT TGGTGAACGAACAATTTGGTTAGACTGTGATGTTATCCAAGCAGACGGAGGAACACGCACAGCCTCTATTACTGGTGCAT TTATTGCAATGGTCATGGCGATTGCAAAACTAGATGAAGAAGTTCCGTTCACGAAATTCCCAGTCAAAGATTTTCTTGCA GCTACAAGTGTTGGCGTTTTAGAAGAAGGTGGAACAGTACTTGACCTTAACTACGTAGAAGATAGCGCGGCACAAGTCGA TATGAATATCATTATGACTGGTAGCGGAGCCTTTGTAGAACTCCAAGGAACAGGCGAAGAAGCTACTTTTTCAGAAACCG AACTTGCTGAACTAATCGCTCTAGGTAAAAAAGGAATAAGCGAACTAATCGAAATCCAAAAAGAAACACTCGGCGACAAA ATCACAGCGCGGATTAAAGGAGAATAA Protein sequence : MRFDGREKNALREIEVTPDYLMHPEGSVLIASGNTKVICSASVETKVPPFMRGEGRGWISAEYSMLPRATNTRNIRESSK GKVTGRTMEIQRLIGRALRAVVDLDALGERTIWLDCDVIQADGGTRTASITGAFIAMVMAIAKLDEEVPFTKFPVKDFLA ATSVGVLEEGGTVLDLNYVEDSAAQVDMNIIMTGSGAFVELQGTGEEATFSETELAELIALGKKGISELIEIQKETLGDK ITARIKGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 4e-56 | 55 |
