Gene Information

Name : lin1070 (lin1070)
Accession : NP_470407.1
Strain : Listeria innocua Clip11262
Genome accession: NC_003212
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1210
EC number : -
Position : 1095229 - 1096116 bp
Length : 888 bp
Strand : -
Note : similar to putative UDP-glucose pyrophosphorylases

DNA sequence : 
ATGAGAGTAAAAAAAGCTGTAATCCCAGCTGCTGGATTAGGAACACGCTTTCTACCAGCAACTAAAGCAATGCCTAAAGA
AATTTTACCTATCGTGGATAAACCAACTATTCAATACATAGTGGAAGAGGCTGTTGCCTCGGGTATAGAGGATATCTTAA
TCGTAACTGGTAAAGGAAAACGCGCTATCGAAGACCATTTCGATTCCGTGCCTGAACTTGAGAATAATTTGCGTGAAAAA
AACAAATTAGAGTTATTACATCTTGTAGAGCAAACAACTAACATTAACTTGCACTTTATCCGTCAAGCAAAACCAAAAGG
ACTTGGTGATGCCATCCTTCAAGCAAAAGGTTTTGTTGGGAATGAGCCATTTATCGTTATGTTAGGTGATGATATTGTAG
AATCCAAAATCCCTTGTTCCAAACAATTGATGAATCAATACGAAAAAACACATAGTTCTGTAATTGGCGTACAAACTGTG
CCACATGAGGAAACATATCGTTACGGTATTATTGATCCAATTAATGAATACGATAAGAATTTATACAATGTAAAAGGTTT
TGTTGAGAAACCAGATCCTGCCAAAGCACCATCCGATTTAGCAATTCTCGGTCGTTACCTACTAACACCACAAATTTTTG
ACTTCTTAGAAACCCAAAAGCCTGGTGCAGGCGGCGAAATCCAATTAACAGACGCAATCAATAGCCTAAATGAAGTACAA
CGCGTATTTGCTTATGACTTTGAAGGCGAACGTTTTGACGTTGGCGATAAATTCGGTTTTATTCAAACTACAATGCAATT
CGCGCTAAAACATCCAGAAATCAAAGAGGATGTCAAAGCATTAATTGATGATTTATATCAACAAGTGCATAAAAACGATA
AAAAATAA

Protein sequence : 
MRVKKAVIPAAGLGTRFLPATKAMPKEILPIVDKPTIQYIVEEAVASGIEDILIVTGKGKRAIEDHFDSVPELENNLREK
NKLELLHLVEQTTNINLHFIRQAKPKGLGDAILQAKGFVGNEPFIVMLGDDIVESKIPCSKQLMNQYEKTHSSVIGVQTV
PHEETYRYGIIDPINEYDKNLYNVKGFVEKPDPAKAPSDLAILGRYLLTPQIFDFLETQKPGAGGEIQLTDAINSLNEVQ
RVFAYDFEGERFDVGDKFGFIQTTMQFALKHPEIKEDVKALIDDLYQQVHKNDKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 2e-78 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lin1070 NP_470407.1 hypothetical protein VFG0964 Protein 1e-87 65