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Name : lin1047 (lin1047) Accession : NP_470384.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : 1.8.1.4 Position : 1065268 - 1066671 bp Length : 1404 bp Strand : + Note : highly similar to dihydrolipoamide dehydrogenase, E3 subunit of pyruvate dehydrogenase complex; E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide DNA sequence : ATGGTAGTAGGCGATTTTCCAGAAGAAAGAGACACCATAGTCATCGGTGCAGGCCCAGGTGGGTATGTAGCCGCAATCCG AGCTGCACAACTCGGACAAAAAGTTACCATTATTGAAAAAGAATATTACGGTGGTGTGTGCTTAAACGTTGGATGTATTC CTTCTAAAGCACTTATCACAATCGGTCACCGTTTTAAAGAAGCTGGACACTCTGATAACATGGGTATTACAGCGGACAAC GTGAACTTAGATTTCACAAAAGCACAAGAATGGAAAGGCGGCGTAGTTAACAAGCTTACATCAGGTGTTAAAGGCCTTCT TAAGAAAAATAAAGTTGAAATGTTAGAAGGAGAAGCGTTCTTCGTGGATGATCATTCCCTGCGTGTGATCCACCCTGACT CCGCTCAAACTTATACATTCAATAACGTTATCATTGCAACAGGATCTCGTCCAATCGAAATCCCAGGTTTCAAATATGGT AAACGTGTATTAAGCTCGACTGGTGCACTTGCATTAACTGAAGTTCCGAAAAAATTAGTCGTAATTGGCGGCGGATATAT CGGAACAGAACTAGGTGGAGCATTCGCTAACCTTGGTACAGAACTAACTATCCTTGAAGGCGGTCCAGAAATCTTACCAA CATACGAAAAAGACATGGTTTCCCTAGTTAAACGTAATCTGAAAAGCAAAAACGTTGAAATGGTTACTAAAGCACTTGCA AAATCTGCTGAAGAAACTGAAAACGGCGTTAAAGTAACTTATGAAGCTAACGGTGAAACAAAAACTATCGAAGCTGATTA TGTTTTAGTAACAGTAGGTCGTCGTCCAAATACAGACGAAATCGGTTTAGAACAAGCTGGCGTTAAAGTAACAGAACGCG GTTTAGTAGAAGTTGACAAACAAGGTCGCTCTAACGTTTCTAACATTTTCGCCATTGGTGACATCGTTCCTGGTGTTCCT CTAGCTCACAAAGCTAGCTATGAAGCAAAAATCGCTGCTGAAGCAATTGCTGGCGAAAAAGCAGAAAACGATTATACAGC ACTTCCAGCTGTTGTTTTCAGTGACCCAGAACTTGCAACAGTTGGTTTAACAGAAAAAGAAGCAAAAGAAAAAGGCTTTG ATGTAAAAGCTGCTAAATTCCCATTCGGCGGTAACGGTCGTGCGCTTTCTTTAGATGCACCTGAAGGATTTGTTCGTCTA GTTACTCGTAAAGAAGATGGCCTAGTTATCGGTGCACAAGTTGCCGGAATGAACGCTTCTGATATTATTTCAGAAATCGG CTTAGCAATCGAATCAGGTATTACAGCTGAAGACATCGCGCTTACTATCCACGCTCATCCATCCCTTGGAGAGCTTACAA TGGAAGCAGCTGAACTTGCTTTAGGTCGTCCAATTCACATGTAA Protein sequence : MVVGDFPEERDTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITIGHRFKEAGHSDNMGITADN VNLDFTKAQEWKGGVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRVIHPDSAQTYTFNNVIIATGSRPIEIPGFKYG KRVLSSTGALALTEVPKKLVVIGGGYIGTELGGAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALA KSAEETENGVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNVSNIFAIGDIVPGVP LAHKASYEAKIAAEAIAGEKAENDYTALPAVVFSDPELATVGLTEKEAKEKGFDVKAAKFPFGGNGRALSLDAPEGFVRL VTRKEDGLVIGAQVAGMNASDIISEIGLAIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 2e-96 | 49 |
