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Name : lin1013 (lin1013) Accession : NP_470350.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG4175 EC number : - Position : 1035436 - 1036629 bp Length : 1194 bp Strand : + Note : highly similar to glycine betaine ABC transporter (ATP-binding protein) DNA sequence : TTGAGCAAGATTAAAGTGGAAGAACTAACGAAGATTTTTGGAAAAAAGGCTTCTAAAGCATCTTCTTTACTTTCTCAAGG GAAATCGAAAACAGAGATTTTGAAAGAAACAGGGGCGACTATTGGTGTTAATAAAGCATCTTTTAGCGTAGAAGAAGGAG AAATTTTCGTTATAATGGGGCTTTCTGGTAGTGGGAAGTCAACTTTGGTACGACTTTTAAACCGTCTAATTGAGCCTACG AGCGGAAAAATTTGGCTGGACGGAAAAGAACTCTCTAGTTTAAATAAAAAAGAACTTTTGGAAGTTAGAAGAAAAAGCAT GAGTATGGTCTTCCAAAATTTTGGTTTATTTCCAAATAGAACGATTAACCGTAATGTTGAATACGGGCTTGAAATTCAAG GAATGAACAAAGAAGAACGTGAGAAAAATGCAGCAGAATCGCTTGCACTTGTTGGTTTAGCTGGTTACGGCGAACAATAT CCTTCCCAACTTTCTGGTGGGATGCAGCAACGTGTAGGGCTAGCGAGAGCACTTGCTAACAATCCAGATATTTTATTAAT GGATGAGGCTTTCTCAGCACTTGACCCACTTAACAGAAAAGACATGCAAGATCAACTACTAGATTTACAAGATAAAATGA AGAAAACAATCATCTTTATTACCCATGATTTGGATGAGGCGCTTCGTATTGGCGACCACATTATGATTATGCGTGATGGT TCTGTTGTTCAAACTGGTTCCCCGGAAGAAATTCTGGCACATCCAGCAAATGAATACGTAGAAAAATTCATTGAAGATGT AGACCGTTCCAAAGTTTATACAGCGAGCAACGTAATGATACGCCCAGAAATCGTTAATTTTGAAAAAGACGGCCCTCGTG TCGCTTTAAAACGGATGCGTGAAGCTGGAACATCTAGTGTATTTGTTGTTAAGCGTAACCGTGAGTTAGTTGGTATTGTC CATGCAGCGGAAGTTTCTAAACTAGTTAAAGAAAATATTACTTCGCTTGAAACTGCTTTACACAGTGATGTACCGACAAC TGGTCCGGATACGCCACTTGCAGAAATCATGGATACTATCTCGACAACAACGATTCCAATCGCTGTAACCGAAGATGGAA AATTAAAAGGAATTATTATTCGCGGATCTGTTCTGGCCGCACTTTCTGGAAACGAGGTGAACGTTAATGCCTAA Protein sequence : MSKIKVEELTKIFGKKASKASSLLSQGKSKTEILKETGATIGVNKASFSVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT SGKIWLDGKELSSLNKKELLEVRRKSMSMVFQNFGLFPNRTINRNVEYGLEIQGMNKEEREKNAAESLALVGLAGYGEQY PSQLSGGMQQRVGLARALANNPDILLMDEAFSALDPLNRKDMQDQLLDLQDKMKKTIIFITHDLDEALRIGDHIMIMRDG SVVQTGSPEEILAHPANEYVEKFIEDVDRSKVYTASNVMIRPEIVNFEKDGPRVALKRMREAGTSSVFVVKRNRELVGIV HAAEVSKLVKENITSLETALHSDVPTTGPDTPLAEIMDTISTTTIPIAVTEDGKLKGIIIRGSVLAALSGNEVNVNA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuAA | YP_281521.1 | glycine betaine transport ATP-binding protein | Not tested | Not named | Protein | 2e-88 | 56 |
