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Name : clpE (lin0996) Accession : NP_470333.1 Strain : Listeria innocua Clip11262 Genome accession: NC_003212 Putative virulence/resistance : Virulence Product : ATP-dependent protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1018475 - 1020649 bp Length : 2175 bp Strand : - Note : - DNA sequence : ATGAACTGTGAAAAATGCAATCAAAATCAAGCAACAATCCAACTATATATGAATATTAACGGCAAGCGTGTAGAAATGCC GCTTTGTGCCTCTTGTTACGCAGAAGTTAGAAATCAAGCAAACTTTGGGGCAAATGAATTTCCAGGTGCTGGCGGTTCCC CGTTCGATGATATTTTCCGTCAACTAAGTGGCGCTGCAAACCAAGCAAGCCGTGAACAACAAAGTCAAAGAAACGCACAA GTACAAACACAAACTGGTGGCGCTGGAAACGGCTTACTAGATGAATTTGGAACAAACTTAACAGATATGGCGAAAAACGA TCAACTCGATCCAGTAATTGGTCGTGACAAAGAAATTAAACGTGTCATCGAAATCTTGAATCGTCGTAATAAAAACAATC CTGTCCTTATCGGTGAACCAGGTGTTGGTAAAACTGCGGTTGTCGAAGGACTTGCAAATGCAATTGTCGCAGGTGAAGTT CCAAGTAAGTTAATGAACAAAGAAGTTATCTTACTAGATGTTGCTTCTCTCGTTTCTGGAACAGGAATCCGCGGACAGTT TGAAGAACGAATGAAACAATTAATTAAAGAATTACAAGAACGCAAAAACACGATCTTGTTTATTGATGAAGTGCACACAA TTGTCGGCGCTGGATCCGCAGAAGGTTCAATGGACGCAGGAAATATTTTAAAACCAGCCTTAGCTCGCGGTGACTTACAA ATGATTGGTGCAACAACGCTAAAAGAATATCGTACTATCGAAAAAGATGCTGCACTTGAGCGTCGTTTCCAACCAGTAAC GGTGAATGAACCTTCTAACGAAGAAACACTTACTATTTTAAATGGCTTGAAATCCAAATATGAAGATTTCCATGAAGTTG TTTATTCTCCGGAAGCTTTAAAAGCAGCGGTTGAATTAAGCTCTCGCTACATTCAAGACCGTCATTTGCCAGATAAAGCG ATTGATTTAATGGATGAAGTTGGTTCAAAATACAATCTATCTATTGAAAAATTGGATGAAAACACCGTTAGTGAACGTGT TGCTCGTTTAGAAGAAGAAAAAAACCAAGCTCTCCAAATGGAAGACTACGAAAAAGCAGCCAAAGTTCGGGACGAAATTA CTCGACTTGAAGAAAATAAAACTAGTAACTCCTTTTCAGAACGGCCAGTTATTCAATCTTCTGATATTCAAGCGATTATT GAAGAAAAAACTGGTATTCCAGTAGGACGTTTACAAGAAGACGAACAATCCAAAATGAAAAACCTAGAAAGCAACTTAAC CGGAAAAGTAATCGGTCAAGATGATGCAGTGAAAAAAGTAGCCAAAGCAATCCGTCGTAGCCGTGTTGGTTTAAAAGCTA AAAATCGTCCAATTGGTTCGTTCTTATTCGTTGGACCTACTGGTGTCGGAAAAACAGAACTTGGTCGCACACTTGCTCGT GAATTATTTGGTACAAGTGAAGCGATGATTCGTTTAGATATGAGTGAATTCATGGAAAAACACAGCGTCTCTAAATTAAT CGGTTCTCCCCCAGGCTATGTTGGTCACGAAGAAGCTGGTCAATTAACTGAAAAAGTTCGTCGTAATCCTTATAGCATCA TCCTTTTAGACGAAATTGAAAAAGCACACCCGGATGTGCAACATATGTTTTTACAAATTCTAGAGGATGGACGTCTAACT GATTCTCAAGGACGCACAGTAAGCTTTAAAGATACAGTGATTATCATGACAAGTAATGCTGGTACGACTGATACAGAAGC TTCTGTTGGCTTTAATACAGCAACTGACAATAAACTTGAAAAAGGCTCAGATATCCTTGCAAAACTAGGCGCATACTTTA AACCAGAATTTTTAAACCGTCTAGATAGCGTTATTGAATTTAAATCTCTTGAAAAAGATGATTTAGTACAAATTATCGAC TTAATGCTCGTTGACTTAAATTCAATGCTCGCACAAGAAGGCGTAACTATAGACGTTTCTAAAGAAGTTAAAGAACATTT AATCGAGCTTGGATATGATCCTAAATTTGGTGCTAGACCACTTCGCCGCACAATCCAAGAACATTTAGAAGATGCGATTG CCGATAGTTTAATTGATCAACCAGAAGCGAAGAAATTAAATGCCACACTAAATGACGATAAAAATATCGTTATAACTGAA CAAGTAACAGTTTAA Protein sequence : MNCEKCNQNQATIQLYMNINGKRVEMPLCASCYAEVRNQANFGANEFPGAGGSPFDDIFRQLSGAANQASREQQSQRNAQ VQTQTGGAGNGLLDEFGTNLTDMAKNDQLDPVIGRDKEIKRVIEILNRRNKNNPVLIGEPGVGKTAVVEGLANAIVAGEV PSKLMNKEVILLDVASLVSGTGIRGQFEERMKQLIKELQERKNTILFIDEVHTIVGAGSAEGSMDAGNILKPALARGDLQ MIGATTLKEYRTIEKDAALERRFQPVTVNEPSNEETLTILNGLKSKYEDFHEVVYSPEALKAAVELSSRYIQDRHLPDKA IDLMDEVGSKYNLSIEKLDENTVSERVARLEEEKNQALQMEDYEKAAKVRDEITRLEENKTSNSFSERPVIQSSDIQAII EEKTGIPVGRLQEDEQSKMKNLESNLTGKVIGQDDAVKKVAKAIRRSRVGLKAKNRPIGSFLFVGPTGVGKTELGRTLAR ELFGTSEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLT DSQGRTVSFKDTVIIMTSNAGTTDTEASVGFNTATDNKLEKGSDILAKLGAYFKPEFLNRLDSVIEFKSLEKDDLVQIID LMLVDLNSMLAQEGVTIDVSKEVKEHLIELGYDPKFGARPLRRTIQEHLEDAIADSLIDQPEAKKLNATLNDDKNIVITE QVTV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 5e-156 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpE | NP_470333.1 | ATP-dependent protease | VFG0080 | Protein | 0.0 | 96 |
| clpE | NP_470333.1 | ATP-dependent protease | VFG0079 | Protein | 6e-161 | 53 |
