|
Name : nifJ (lmo0829) Accession : NP_464356.1 Strain : Listeria monocytogenes EGD-e Genome accession: NC_003210 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : C : Energy production and conversion COG ID : COG0674 EC number : - Position : 855759 - 859406 bp Length : 3648 bp Strand : + Note : highly similar to pyruvate-flavodoxin oxidoreductase DNA sequence : ATGCGAAATAGAAAAACAATGGATGGAAACACGGCCGCAGCTTATATTTCTTATGCTTTTACAGAAGTTGCAGCAATCTA TCCGATTACCCCTTCCTCCACCATGGCTGAACTTGTGGACGAATGGTCATCAAAGAACAAGAAAAATTTATTTAATGAAC CTGTAAAAGTAGTAGAAATGCAGTCCGAAGCAGGAGCAGCAGGAACAGTTCACGGATCACTTCAAGCTGGCGCGCTAACT AGCACATACACAGCAAGCCAAGGTTTACTTTTAATGATTCCTAATATGTACAAAATTGCCGGCGAACTATTACCAACTGT TTTCCATGTTTCCGCAAGAACGATTTCGGCGGCATCGCTGAATATTTTTGGTGATCATAGTGACGTGATGGCAGCGCGCC AAACTGGATTTGCGATGCTAGCAGAAGGTTCCGTTCAAGAAGTAATGGACTTATCTGCAATTGCTCATCTGGCTTCACTA AAAGGAAGTTTGCCATTTTTAAATTTCTTTGACGGCTTTCGGACGAGCCACGAATTGCAAAAAATCGAAGTACTTGAATA TGACGAATTAGAAAATTTGCTCGACAAAGAGGCATTACAACAATTTAGAAATCGCGCAATGACGCCAAACAATCCTAAAA CATTAGGTTCGAATCAAAATCCAGATATCTTTTTCCAACAAAGAGAAACGGTGAACCGTTATTACGAGGAAATTCCTAGT ATCGTTCAAAATTATATGCAAGAAATTAATCAGCTTCGTGGCACAGATTATGACTTAGTAAATTATTATGGAGCAGAAGA CGCAACAGATGTCATTGTGGCGATGGGCTCCGTAACACCAGTCATCGAGCAAGTCATTGATTACTTAACAACCCAAGGGA AAAAAGTCGGTTTGCTAAATATTCGCTTATATCGTCCTTTCCCAGCAGAAAACTTTTTAACAAAACTGCCGAAAACAGTA GAACGCGTGGCTGTTTTAGACCGGACGAAAGAACCCGGATCAGGCGGGGAACCACTTTTACTCGACGTGCAAAGTGTGCT TTATGATAGTGAGACTCGTCCACTAGTTATTGGCGGTAGATATGGCTTAGGTTCAAAAGATGTTACACCAGACCAGATTC TCGGTGTTTATTCGCACCTAATGACCGAAAAACCAAAACCGCGCTTTACGATTGGGATTACAGATGATATTACGAACCTA TCTATCGAAAATGATGGACCGAGTGACCTCACTTCTGAAAAAACTTTCCAATGCAAATTCTGGGGTTTTGGCTCGGATGG TACTGTTGGCGCAAATAAAGCCGCAATCAAAATTATTGGCGATAATACCGATTTATACGCACAGGGTTACTTTTCCTATG ATTCGAAAAAATCGGGCGGGCTAACTGTTTCGCATTTGCGCTTTGGTGAAAAACGAATTCGCTCAGCCTATCTAATCCAA CAAGCGGATTTTGTCTCATGCTCCACCTCGGCCTATTTACGTTCCTATGATTTATTAAAAGGTTTAAAACCAGGCGGAAC ATTCTTGCTCAATACCATTTGGGAAGGCGAACAGTTAGAACGCCATTTGCCAGCTGCCATGCGCGAATATATTGCGAAAA ATAATATTCAATTTTATACATTAAATGCGATGAGAATTGCAGGAGAAGCGGGACTTGGTAGAAGAATTAATACCGTTATG CAAACGGCCTTTTTCCGAGTGACCGACATTTTACCGTTCGAAAAAGCACTTGCTGATTTAAAAGCATCGGCTATCGCTAC TTACGGGAAAAAAGATATGGCAGTTGCGGAGAAAAATATTCTCGCGATGGACCAAACAGTTGCTAATTTGCATAAAGTAG AAGTTCCTGCAAGCTGGGCAAATCCAGTTGTAACAGCAGAAACGAATGCAACGACTGAAAAACCAGCTTATGTACAAAAT ATCCTTGAGCCAGTGAATCGCTTAGAAGGCGACAACTTGACTGTTGGTGATTTAATTTCGAATGGTATGGTCAGTGGGGC TTATCCTCCGGGGACTGCAGCTTACGAAAAACGCGGAATTGCACTCGAAGTTCCTGAATGGATTTCTGAAAACTGTACGA TGTGCAATGAATGCGCCTTTGTTTGTCCGCATGCTGCCATTCGTCCGATTTTAACAGATGAAGAAGAAATGGAATCTGCT CCAGAAGGCTTTATGACAAGAGAAATGCGCGGCAAAGATGGCCTTCGTTACCGTATCCAAGTTTCCCCAATGGACTGCAC TGGTTGTAACTTATGTGCGGAAACGTGTCCGGCGAAAGATAAAGCGCTTGTAATGAAACCATTTGAAGAAGTGGCAGCTA AAGAAAATCCGAATTGGTCATTTGCGATTAATGTGAAACCGAAGAAAAACCCTGGGAAGAAAAATACTGTACCAGGAAGC CAATTTGAACAACCGTTATTGGAGTTCTCTGGTGCTTGTGCAGGTTGCGGTGAAACTCCTTATGTTAAATTATTAACGCA AATGTTTGGCGACCGGATGATGATTGCTAATGCAACTGGTTGTTCCTCTATTTGGGGCGCATCTGCACCTGCAACGCCTT ATACTGTCAATGATAAAGGACATGGACCGGCGTGGGGCAATTCCCTTTTAGAAGATAACGCAGAATATGGTTATGGTATG TATTTAGCAAACCAAACCATGCGAAAAGCTTTAAATAATAAAGTGACAAAAGCACTCAGAGAAGAAGCCATGTCAGAAAC GTTACGCGAGGCGCTTGTTGATTGGCAACTGCAAATGGACGTTTCAGAAGATACGCGCGAACGTGCAGAAGCATTACAAC TTGCACTTCTTAGTGAGATGGAAGATAGCGCGGCACTCGAATCTATTTATAATGACCGAGAATTATTTATTAAACGATCG CAGTGGATGCTTGGAGGCGACGGCTGGGCATATGATATTGGCTTCGGCGGAATTGATCATGTGTTAGCATCAGGCGAAGA TGTAAATATTTTCGTAATGGATAATGAAGTATATTCAAATACTGGTGGACAATCATCGAAAGCCACACCAACAGCAGCTA TCGCCAAATTTGCTTCAGGTGGGAAATCGGTCGGCAAAAAAGATCTTGGCATTATGGCGATGAGCTATGGAAATATTTAT GTAGCCCAAATTGCGATGGGAGCGAATAAGCGCCAAACCTTAAAAGCAATTGAAGAAGCGGAAGCATATCCAGGGCCATC TTTAATTATTGCTTATACGCCATGTATTAATCACGGAATTTCAAGCGGTATGAAAACGATGCTTAGTGAAACGCAAAAAG CAGTGGAATGCGGCTATTGGAGTTTGTATCGTTACAATCCAGCACTGGAAGAAAAAGGAAAAAATCCAATGACGATGGAC TACAAAAAAGTCGATTTCGATCAATTCGAAGACTTCCTAAAACGCGAAACAAGATACTCGGCGCTCTATAAAGCAAATCC AGAAGTTGCCACAAAACTATCTGAGAAAACCCGCTTGGATGCAGAAAAACGCTTTAAACGCTACGCAACAATGGCCGGGC TTGATTTAGAGAAAATATGGAAGAAAAAAGAAGCAATTGAAGATGTGAAAGCGCCCGTTGATGATGAGCGAGCAGCAAGG AAAGCAGCACGTGAAGCAAGAAGATTAGCGCGGGAGCAAGGTAAATAA Protein sequence : MRNRKTMDGNTAAAYISYAFTEVAAIYPITPSSTMAELVDEWSSKNKKNLFNEPVKVVEMQSEAGAAGTVHGSLQAGALT STYTASQGLLLMIPNMYKIAGELLPTVFHVSARTISAASLNIFGDHSDVMAARQTGFAMLAEGSVQEVMDLSAIAHLASL KGSLPFLNFFDGFRTSHELQKIEVLEYDELENLLDKEALQQFRNRAMTPNNPKTLGSNQNPDIFFQQRETVNRYYEEIPS IVQNYMQEINQLRGTDYDLVNYYGAEDATDVIVAMGSVTPVIEQVIDYLTTQGKKVGLLNIRLYRPFPAENFLTKLPKTV ERVAVLDRTKEPGSGGEPLLLDVQSVLYDSETRPLVIGGRYGLGSKDVTPDQILGVYSHLMTEKPKPRFTIGITDDITNL SIENDGPSDLTSEKTFQCKFWGFGSDGTVGANKAAIKIIGDNTDLYAQGYFSYDSKKSGGLTVSHLRFGEKRIRSAYLIQ QADFVSCSTSAYLRSYDLLKGLKPGGTFLLNTIWEGEQLERHLPAAMREYIAKNNIQFYTLNAMRIAGEAGLGRRINTVM QTAFFRVTDILPFEKALADLKASAIATYGKKDMAVAEKNILAMDQTVANLHKVEVPASWANPVVTAETNATTEKPAYVQN ILEPVNRLEGDNLTVGDLISNGMVSGAYPPGTAAYEKRGIALEVPEWISENCTMCNECAFVCPHAAIRPILTDEEEMESA PEGFMTREMRGKDGLRYRIQVSPMDCTGCNLCAETCPAKDKALVMKPFEEVAAKENPNWSFAINVKPKKNPGKKNTVPGS QFEQPLLEFSGACAGCGETPYVKLLTQMFGDRMMIANATGCSSIWGASAPATPYTVNDKGHGPAWGNSLLEDNAEYGYGM YLANQTMRKALNNKVTKALREEAMSETLREALVDWQLQMDVSEDTRERAEALQLALLSEMEDSAALESIYNDRELFIKRS QWMLGGDGWAYDIGFGGIDHVLASGEDVNIFVMDNEVYSNTGGQSSKATPTAAIAKFASGGKSVGKKDLGIMAMSYGNIY VAQIAMGANKRQTLKAIEEAEAYPGPSLIIAYTPCINHGISSGMKTMLSETQKAVECGYWSLYRYNPALEEKGKNPMTMD YKKVDFDQFEDFLKRETRYSALYKANPEVATKLSEKTRLDAEKRFKRYATMAGLDLEKIWKKKEAIEDVKAPVDDERAAR KAAREARRLAREQGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFJ97267.1 | pyruvate ferredoxin | Virulence | Not named | Protein | 0.0 | 52 |
