Gene Information

Name : lmo0641 (lmo0641)
Accession : NP_464168.1
Strain : Listeria monocytogenes EGD-e
Genome accession: NC_003210
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 681543 - 683423 bp
Length : 1881 bp
Strand : +
Note : similar to heavy metal-transporting ATPase

DNA sequence :
ATGAAAGATTGGATGAAGCAGAATTGGCAATTTATTACGACAGGTATTAGCGGAATTTTGATTGTGATTGGCTGTTTGGT
CGGTAGTGATGTTGGTGACTTTTGGACAGCGATTATTTTCCTAAGTGCTTTTGTTATTGGTGGTTTTGAGCAAGCTAAAG
AAGGTATTCAAGCAACTATTAAAACAAAGAAGTTAAACGTGGAGCTTTTGATGATTTTAGCGGCTACCGGTGCATCGATT
ATTGGTTATTGGTTTGAAGGGGCCATACTTATTTTTATTTTCTCGGTTAGTGGGGCATTAGAAACGTATACGACGAATAA
AAGTAAGCGCGAAATCACGAAATTAATGGCATTTCAACCAGAACGAGCTTTTCGTTTACTTTCTAATGGGGATTTAGAGG
AAGTTGCTGCAAAAGAGCTACAACTGGATGATATGGTCTTCGTTCGGCCGGGAGAAAGTGTTCCAATCGATGGAGTGATT
GTTCGCGGCTCAACCACATTAAATGAAGCAGCCATTAATGGGGAATCTGTTCCAGCAACGAAAACTGTTGGTGCGGATGT
GTTTGGTGGAACGGTCAATGTAAGTAGCGCTATTACGGTTAAAGTAACACAAACATTTGAAAATACGATTTTCAGTAAAA
TTATTCGTTTAGTAGAAACTGCTCAAAGCGAACCGTCTAAAACCGCGCGTTTTATTGAACGATTTGAGGATGTTTATGTA
AAAGCAGTTCTATTATTTGTGTTAGTAATGATGTTCTTACCTCATTTTGCACTAGGGTGGTCGTGGAATGAAACCTTTTA
TCGCGCGATGGTTTTGTTAACAGTTGCATCACCTTGTGCGCTAGTAGCTTCTGTAACGCCTGCGACTTTAGCGGCAATTT
CTAACGGTGCGCGTCACGGTATTTTATTTAAAGGCGGCGTACACTTGGAAAACTTGCGCGGTGTAAAAGCCATTGCATTT
GATAAAACGGGAACTTTGACAAATGGAACGCCCGCACTAACCGATCGACTATTCGCCGAAAATGTTGATAAACAGTTAGT
AATCAATGTGGTTGGAGCGATGGAACGACAATCTTTACATCCGTTAGCTGCGGCAATAACACAAGACTTAGAACCGGAAA
TCACCGAAAAGTTAACGGAAATAGAAGTGACGGATGTACCTGGTTGGGGAGTTCAAGCGATTTATCGAGAAGGGAATTGG
CAAGTTGGAAAGGCTGGGTTTGTTGGGAAAGAAGCAGCGGCAGCATTTTCAAATGGCGCATTTGAACGACTTGCAAGTGA
AGGGAAAACGATTGTTTATGTAGCTAAAGACGGCGTAATTCAAGCCATGTTTGCTCTTAAAGATACATGTCGTCCTGAAG
CTATTCGTACGATCAAAGCCCTTCAAGCAAAAGGGATTAAGACTATTATGGTGACGGGCGATAATGAGCAGACAGGTGCG
GCAATTCAAGCCGAACTAGGGATGGACTATGTCGTTTCCGGTTGTTTACCTGAGAAAAAAGTGGATGTGTTAAGAGAATT
GTCGGTTACTTATGGCAGTGTGGCAATGGTTGGCGATGGAATTAATGATGCCCCGGCACTTGCACATGCGGCTGTTGGAA
TTGCAATGGGCGAAGGTACAGATATCGCAATGGAAACAGCCGATGTTGTCCTAATGAAAAATGATTTAGAAAAAATTCCC
TACGCTTACACGCTTTCGGAACGACTTCACTGGATCACCTGGCAAAATATTTGTTTTGCGATTGCTGTAATTCTTGTTTT
AATAACGGCTAATGTCTTCCAACTAATCAATTTACCATTCGGGGTTGTGGGACATGAGGGAAGTACTATTTTAGTTATTT
TAAATGGTCTTAGATTGCTTAGATCTAACCGGAAAAAGTGA

Protein sequence :
MKDWMKQNWQFITTGISGILIVIGCLVGSDVGDFWTAIIFLSAFVIGGFEQAKEGIQATIKTKKLNVELLMILAATGASI
IGYWFEGAILIFIFSVSGALETYTTNKSKREITKLMAFQPERAFRLLSNGDLEEVAAKELQLDDMVFVRPGESVPIDGVI
VRGSTTLNEAAINGESVPATKTVGADVFGGTVNVSSAITVKVTQTFENTIFSKIIRLVETAQSEPSKTARFIERFEDVYV
KAVLLFVLVMMFLPHFALGWSWNETFYRAMVLLTVASPCALVASVTPATLAAISNGARHGILFKGGVHLENLRGVKAIAF
DKTGTLTNGTPALTDRLFAENVDKQLVINVVGAMERQSLHPLAAAITQDLEPEITEKLTEIEVTDVPGWGVQAIYREGNW
QVGKAGFVGKEAAAAFSNGAFERLASEGKTIVYVAKDGVIQAMFALKDTCRPEAIRTIKALQAKGIKTIMVTGDNEQTGA
AIQAELGMDYVVSGCLPEKKVDVLRELSVTYGSVAMVGDGINDAPALAHAAVGIAMGEGTDIAMETADVVLMKNDLEKIP
YAYTLSERLHWITWQNICFAIAVILVLITANVFQLINLPFGVVGHEGSTILVILNGLRLLRSNRKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA YP_005732869.1 cadmium-translocating P-type ATPase Not tested Type-V SCCmec Protein 3e-102 43
SE0062 NP_763617.1 copper-transporting ATPase copA Not tested SCCpbp4 Protein 2e-102 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lmo0641 NP_464168.1 hypothetical protein BAC0092 Protein 2e-110 45