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Name : lmo0342 (lmo0342) Accession : NP_463872.1 Strain : Listeria monocytogenes EGD-e Genome accession: NC_003210 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 371130 - 373127 bp Length : 1998 bp Strand : - Note : similar to transketolase DNA sequence : ATGAGCAGAATTGATGAACAAATGGTTAACTCGATTCGTGTATTATCAATGGATATGATTGAAAAAGCGAACTCCGGACA TCCCGGTTTACCGATGGGAGCCGCACCAATGGCTTTCTCACTTTGGAAAAATCATTTAAAATTCAATCCAGAACATCCAA CTTGGTTTAACCGCGATCGCTTCGTTCTGTCAGCTGGTCACGGTTCAGCAATGCTTTATAGTTTGCTCCATCTATTTGGT TATGATTTACCAATGAGCGAGCTGAAAAACTTCCGCCAAACTGGCAGTAAAACGCCCGGTCATCCTGAATTTGGTCATAC GGTTGGTGTGGATGCAACTACTGGTCCGCTTGGTCAAGGTTTCGCAATGGGAGTTGGGATGGCAATGGCCGAGGCTCACC TTGGTGCCAAATTTAACCAACCTGAATTCCCTGTTGTCGATCATAACACCTACGTGCTATGCGGAGACGGCTGCTTGATG GAAGGTATTTCCTATGAAGCCGCATCCCTTGCCGGCCATTTAAAACTGGGAAAATTAGTTGTTTTATATGATTCAAACGA TATTTCACTTGATGGCGATTTAAACGAGTCATTTTCAGAAGACATCGAACTCAGATTCCGAGCTGCTGGTTGGCAAACGC TACGTGTGGACGACGGAAACGACTTAGATGCGCTTGATGCAGCAATCCATCTTGCAAAAACGGAAAAATCCCGCCCAACT TTGATTGAAGTGAAGACAGTGATTGGTTATGGTAGCCCTGGAAAAGCCGGAAAATCGGCGGCTCACGGATCCCCACTTGG TGAAAAGGAACTCAAGCTTGCAAAAGAAGCTTACGACTGGCAAATGCCACCTTTTGAATTACCGAAAACCGTCGAAAACC AAAAAGAATTTTATCATTCCAAAGGTCGCGCGAGTGAAAGCAGCTGGCTCCGGACATTCAATGCTTACAAACAAAAATAT CCAGCACTAGCAGAAAGCTTGCAACACCTAATGGACGATAATTTGACAGCTGATTGGGACGCAGAACTTCCTGTCTTCGA TGAAAATGCAGATAAACCAGTTGCGACTCGTGAAGTATCGGGGATTATTCTTCAAGAATTGGAGAAAAAATTGCCTAACT TATTTGGTGGCGCAGCTGATTTAGCTTCCTCCAATAAAACCCATTTAAAAGCTAGCGAACGGTTCGCTCCAGGTAATTAC GCGGCCAAAAATATCTCGTTCGGCGTCCGCGAATTCGCGATGGGAGCAGCAGTCAACGGAATGACGCTTCATGGCGGAGT TCAAGCATTCGGCGCGACTTTCTTCGTTTTCTCGGATTATCTACGTTCCGCGATTCGTTCGGCAGCCTTAATGGGCATTC CATCCACCTTCATTATGACCCATGATTCCATCGCGGTTGGTGAAGACGGTCCAACACACGAACCAATCGAGCATCTCGCA TCCTTCCGCGCCATGCCGGGACTTCACGTAATCCGACCAGCTGACGGCAACGAAACCGTCGAAGCATACCGCTTTGCCTT TACTCAAAAAGAACAACCAACCATGCTAGTCCTCAGCCGCCAAAACCTGCCAATTTTACCAAACAGCGCAGCAAAAGCGA AAACCGGACTTGCAAAAGGTGCCTACATCTTAGCCGATTCCCCGCTGGACAAGCTAGATATCATCCTACTCGCTTCCGGA TCCGAAGTGCACCTAATGACAGCTGTCAGAGATAATCTCGCTAAAAAAGGCTTCGGCGCACGCGTAGTCAGCATGCCAAG CTTTGATTTATTCGACAAACAAAGCCCCGAATACAAAGAGTCCATTTTGCCAAAAGCAGTGAAAAAACGCTTCGCCGCTG AAATGGGCGCATCGTACGGCTGGCATAAATACCTCGGTGACTCAGGTGAAATCCTCGCGATTGATTCATTCGGAATGTCT GGCCCGGGAGACGAGCTGGCAGAGCGATTTGGATTTACTGTGGAGAATTTGACGGAGCTTGCGTTGAAACAGTTGTAG Protein sequence : MSRIDEQMVNSIRVLSMDMIEKANSGHPGLPMGAAPMAFSLWKNHLKFNPEHPTWFNRDRFVLSAGHGSAMLYSLLHLFG YDLPMSELKNFRQTGSKTPGHPEFGHTVGVDATTGPLGQGFAMGVGMAMAEAHLGAKFNQPEFPVVDHNTYVLCGDGCLM EGISYEAASLAGHLKLGKLVVLYDSNDISLDGDLNESFSEDIELRFRAAGWQTLRVDDGNDLDALDAAIHLAKTEKSRPT LIEVKTVIGYGSPGKAGKSAAHGSPLGEKELKLAKEAYDWQMPPFELPKTVENQKEFYHSKGRASESSWLRTFNAYKQKY PALAESLQHLMDDNLTADWDAELPVFDENADKPVATREVSGIILQELEKKLPNLFGGAADLASSNKTHLKASERFAPGNY AAKNISFGVREFAMGAAVNGMTLHGGVQAFGATFFVFSDYLRSAIRSAALMGIPSTFIMTHDSIAVGEDGPTHEPIEHLA SFRAMPGLHVIRPADGNETVEAYRFAFTQKEQPTMLVLSRQNLPILPNSAAKAKTGLAKGAYILADSPLDKLDIILLASG SEVHLMTAVRDNLAKKGFGARVVSMPSFDLFDKQSPEYKESILPKAVKKRFAAEMGASYGWHKYLGDSGEILAIDSFGMS GPGDELAERFGFTVENLTELALKQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 8e-142 | 48 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 9e-140 | 47 |
