|
Name : lmo2101 (lmo2101) Accession : NP_465625.1 Strain : Listeria monocytogenes EGD-e Genome accession: NC_003210 Putative virulence/resistance : Unknown Product : pyridoxal biosynthesis lyase PdxS Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0214 EC number : - Position : 2181329 - 2182216 bp Length : 888 bp Strand : + Note : similar to a protein required for pyridoxine synthesis; with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate DNA sequence : ATGGAGAAAAAAGTTGGTACAGATCGTGTAAAACGTGGTATGGCGCAAATGCAAAAAGGTGGCGTCATTATGGATGTAGT TAATGCCGAACAAGCAAAGATTGCGGAAGAAGCTGGTGCTGTTGCAGTTATGGCGCTTGAACGGGTTCCTTCTGATATTC GCGCAGCCGGTGGTGTCGCTCGTATGGCTGATCCTCGTATTGTGGAAGAAGTAATGAAAGCTGTATCTATCCCTGTTATG GCAAAAGCACGTATTGGTCATATTACAGAAGCTCGCGTCCTTGAAGCAATGGGCGTGGATTATATTGACGAAAGTGAAGT ATTAACTCCCGCTGATGATGAATTCCATTTACTAAAATCAGATTTCACCGTTCCTTTCGTATGTGGTTGCCGAGATATCG GTGAAGCGCTCCGCCGTATCGGTGAAGGTGCTGCCATGCTCCGTACAAAAGGAGAACCTGGAACAGGCAATATCGTCGAA GCAGTCCGTCACATGCGCCAAGTAAACGGCCAAATCCGCCAAATCGCAGGCATGACAGATGATGAATTAATGGTTGCTGC TAAAAACTTCGGTGCTCCATATGAATTAATCAAAGAAATTAAAACACTTGGCAAACTTCCGGTCGTTAATTTTGCCGCTG GTGGCGTTGCGACTCCCGCTGATGCTGCACTAATGATGGAACTTGGAGCAGACGGTGTTTTCGTTGGATCAGGTATTTTC AAATCCGATAACCCTGCCAAATTTGCCAGTGCGATTGTTCAAGCCACTACCTACTACACAGACTATGAATTAATCGGAAA ACTTTCCAAAGAGCTAGGTTCCCCGATGAAAGGAATCGAAATGTCTCGCCTTAACCCAGAAGACAGAATGCAAGATCGGA GTTTTTAA Protein sequence : MEKKVGTDRVKRGMAQMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMADPRIVEEVMKAVSIPVM AKARIGHITEARVLEAMGVDYIDESEVLTPADDEFHLLKSDFTVPFVCGCRDIGEALRRIGEGAAMLRTKGEPGTGNIVE AVRHMRQVNGQIRQIAGMTDDELMVAAKNFGAPYELIKEIKTLGKLPVVNFAAGGVATPADAALMMELGADGVFVGSGIF KSDNPAKFASAIVQATTYYTDYELIGKLSKELGSPMKGIEMSRLNPEDRMQDRSF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pdxS | YP_005137204.1 | pyridoxine biosynthesis protein | Not tested | Not named | Protein | 9e-81 | 63 |
| DIP0227 | NP_938620.1 | pyridoxal biosynthesis lyase PdxS | Not tested | Not named | Protein | 1e-80 | 62 |
| pdxS | YP_005141805.1 | pyridoxine biosynthesis protein | Not tested | Not named | Protein | 2e-80 | 62 |
