Gene Information

Name : lmo1679 (lmo1679)
Accession : NP_465204.1
Strain : Listeria monocytogenes EGD-e
Genome accession: NC_003210
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 4.4.1.8
Position : 1734776 - 1735948 bp
Length : 1173 bp
Strand : -
Note : similar to cystathionine beta-lyase; catalyzes the formation of L-homocysteine from cystathionine

DNA sequence :
GTGGCTAAAGAATACGCGCAAGATACGGCTGTAATTAAAGCGAGCCTCGGGATTGATAAAGAAACAGGTGCGCTTAATAC
GCCGATTCATTTATCTTCTACTTTCCATCAACATGATTTTGATAACTACCATGCTTATGATTATGCAAGAAGTGGAAACC
CAACCAGGGAAAAAGTGGAACAGGCGATTGCAGAATTGGAAGGTGGTACGAATGGTTTTGCCTTTGCTAGTGGAATGGCG
GCTGTTTCTGCGGCACTTTTTACGCTTTCAAAAGGAGATCATTTTATTATTGCAAAAGATGTGTACGGCGGGACGTTTCG
TTTGGTGGAACAAGTGTTGCCGCGGTTTGGGATTACGCATACTTTTGTTGATACAACAAATATTGACGAGGTTGCTAAGG
CGTTTCAAGCAAATACAAAATTGGTTTATTTGGAAACTCCTTCTAATCCGCTGCTACATGTGACGGATATTCGCACAGTT
GCTAAACTTGCGAAAGCGAATGGTTGCTATACATTTGTCGATAATACATTTTTAACGCCGCTGATTCAAAAACCGTTAGA
ATTAGGTGCGGACTTAGTTATCCATAGTGCGACGAAATTTCTTGGTGGGCATAGTGATATTTTGGCGGGGCTAATTGTCA
CAAATAATCCTAATCTTGCTGAAGCAGTGTACTTTTTGCAAAATTCGACTGGTGGGGTTCTTGGAGTGCAGGATTCGTGG
TTGTTATTGCGCGGACTAAAAACACTTTCTGTGCGGATGAAGGCTGGGACGGAAACGGCGGAGAAAATTGCGCTATTTTT
AAATGCGGAGCCAGATGTGGTTGCGGTGCATTATCCGGGGTTACCGTCGCATGCGGGGTATGACATTCAAGTGGAACAGG
CGACAAGCGGCGGGGCTGTTTTATCGTTTGATTTAGGCAGTGAGGAAGCGGTGCGAGAACTAGTTACACATTTGGAATTG
CCAGTGTTCTCTGTGAGTCTAGGTGCGGTCGAGAGTATTCTTTCTTACCCGGCTAAAATGTCTCATGCGGCTGTTCCGGA
AGAGGAACGTTTGGCGCAAGGGATTACGCCAGGATTATTACGTTTTTCAGCTGGACTAGAAGATGCTGAAGACTTGATTG
CAGATTTAAAACAAGCACTTTCATTCATTAAGAAGGGAAGTGTTGCGAAGTGA

Protein sequence :
MAKEYAQDTAVIKASLGIDKETGALNTPIHLSSTFHQHDFDNYHAYDYARSGNPTREKVEQAIAELEGGTNGFAFASGMA
AVSAALFTLSKGDHFIIAKDVYGGTFRLVEQVLPRFGITHTFVDTTNIDEVAKAFQANTKLVYLETPSNPLLHVTDIRTV
AKLAKANGCYTFVDNTFLTPLIQKPLELGADLVIHSATKFLGGHSDILAGLIVTNNPNLAEAVYFLQNSTGGVLGVQDSW
LLLRGLKTLSVRMKAGTETAEKIALFLNAEPDVVAVHYPGLPSHAGYDIQVEQATSGGAVLSFDLGSEEAVRELVTHLEL
PVFSVSLGAVESILSYPAKMSHAAVPEEERLAQGITPGLLRFSAGLEDAEDLIADLKQALSFIKKGSVAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-76 49
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 6e-75 48
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 2e-75 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lmo1679 NP_465204.1 cystathionine beta-lyase BAC0207 Protein 1e-54 43