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Name : polA (lmo1565) Accession : NP_465090.1 Strain : Listeria monocytogenes EGD-e Genome accession: NC_003210 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : - Position : 1601820 - 1604447 bp Length : 2628 bp Strand : - Note : has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair DNA sequence : GTGAATAAATTAGTATTAATTGATGGAAATAGTATTGCGAATCGCGCTTTTTATGCGTTACCACTTTTAAATAACGATAA AGGTGTTTACACAAATGCGGTGTATGGATTCGCAATGATGTTGATGAATGTACTCGAAAAAGAAAAACCCAGCCATGTGC TCGTTGCATTTGATGCTGGAAAAACAACTTTTAGACATACAACATTTAAAGGTTATAAAGGCGGACGTCAAAAAACCCCA AGTGAGTTATCTGAACAGTTTCCATTCATCCGAGAGCTTTTAACGGCGTATGATATCCCGCAATATGAACTGGCCAATTA CGAGGCAGACGATATTATCGGAACATTGACGAAAAAAGCGGAAGCAGATGGAATGGAAGTTGCAATTATTACCGGAGACC GCGATTTAACACAATTAGCTTCTGAAAAAACAACGGTTTATATTACTAAAAAAGGCATAGCCGATATGGAAACCAACACA CCAGAAACACTAAAAGAAAAATACAATCTAACTCCTGAACAAATCATTGATATGAAAGGTTTAATGGGAGATTCCTCCGA TAATATTCCTGGGATTCCAGGCGTTGGTGAAAAAACAGCCTTAAAACTCTTACATGAATTTGGCGGAACGGTGGAAAGTG TGTTAGAGCACGCCGAGGAAATTTCCGGTAAAAAACTAAAAGAAAAAGTACTAGAAAATAAAGAATTAGCTATTTTAAGT AAAGAGCTAGCTACAATCAATGTGGATTCACCGATTGAATGCACAGTCGAAAGCACGAAATATGACGGGTATCAAACTGA AAAAGTTATCCCTTTATTAAAAGAAATGAATTTTACAACACTTTTGAAAAATATCGAAGGAGATACACCGGAGGAATCGA AAGAACTAAAAGAATTGTCTTTTGAAATAGTAACGGAATTAAAAGAACAACATTTTGGTGGGAAAACCGCACTTTATGTG GAGCTAGAAAATGATAATTACCATACAGCAAACTTCATCGGGCTGACAGTACATTCCAGCCAAGGAACGTATTTCTTTAC AAAAGAAACAGCTGAAAGTAGTGAGGCATTCCGCAAATGGGTAGAAAGTGATCAAACAAAAGTAGTGTATGATGCGAAGA AAACAATAGTTGCAATGAACCGCATTGGTTTGGCAATTTCTGGTATCACATTTGATATCATGTTAGCATCTTACTTGTTA AATCCATCTGATTCAATTGATGATTTTACAAGTGTTGCAGTAAGACATGATTACACAGAAGTAGAAACAGATGAAGCAGT CTACGGAAAAGGTGCTAAACGTAGCACTCCTGAAGAAAGCATTGTTGCGGCACACTTAGCTAGGAAAGCAGTGGCCATTG CTGACTTAGAGAAAAGACTAGTTGATGATTTAGAGAAAAATGAACAACTAGCTTTGATGGAAGACCTAGAGCTACCACTA ACATTTGTTTTAGCAGAAATGGAGATGCAAGGAGTCAGCGTAGATACAGATCGGCTTGAAGATATGAAAGTAGAGCTGGG TGGAAGACTAAAAACATTAGAAGCATCCATTCATTCACTAGCTGGCGAAGAATTCAATATTAATTCACCGAAACAACTAG GTGTAATTTTATTTGAAAAGCTGGAACTTCCCCCAGTCAAGAAAACAAAAACAGGCTATTCAACAGCTGCGGATGTACTG GAAAGTTTGTCTGGAAAACACGCGATTATTGATGAAATTTTGTTATATCGTCAACTTGGTAAAATTCAGTCCACTTATAT CGAAGGGCTGCTTAAAGTGACGGATAAAGAAACACATAAGGTCCATACACGTTTCAACCAAACATTAACGCAAACGGGAC GTTTAAGTTCAGTCGATCCGAACTTACAAAATATCCCGATTCGTTTAGAAGAAGGTCGGAAAATCAGACAAGTTTTTGTG CCGAGTAAACCTGGTTGGAAAATGTTTTCAGCCGATTATTCTCAAGTAGAGTTGCGAGTTTTAGCACATATTTCTGAAGA TGAGAATTTAATTTATGCATTTAAGCACGATTACGATATCCATACGAAAACAGCCATGGACGTGTTTCATGTGGAGAAGG AAGAAGTGGATTCACTAATGCGCCGTCAAGCTAAAGCAGTAAACTTTGGTATTGTATATGGTATTAGTGATTATGGGCTT TCGCAAAACCTTGGTATTACGCGTAAAGAAGCAAAAGACTTTATTGATCGTTACTTTGTGAGTTATCCAGCCGTGAAAGA ATATATGCAAGACATTGTCCGTTTTGCGAAAGAAAAAGGCTATGTAGAGACCATTTTACATCGTCGTCGTTATATTCCGG AGATTGTTAGTCGTAATTTTAATGTTCGCGGATTTGCAGAAAGAACTGCGATGAACACACCTATTCAAGGTAGTGCCGCT GATATTATCAAAAAAGCGATGATTCTGATGAGCGAGCGTTTAGTATCTGAAAAATTAGAAGCAAAATTATTACTTCAAGT GCACGATGAATTAATCTTCGAAGCACCTGAAGCTGAAATAGCTAAATTAGAAGAAATTGTCCCAGATGTTATGGAAAATG CAGTAGAGCTTTCTGTGCCGCTTAAAGTAGATAGCGCCTTTGGTGACACTTGGTACGACGCGAAATAA Protein sequence : MNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKPSHVLVAFDAGKTTFRHTTFKGYKGGRQKTP SELSEQFPFIRELLTAYDIPQYELANYEADDIIGTLTKKAEADGMEVAIITGDRDLTQLASEKTTVYITKKGIADMETNT PETLKEKYNLTPEQIIDMKGLMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESVLEHAEEISGKKLKEKVLENKELAILS KELATINVDSPIECTVESTKYDGYQTEKVIPLLKEMNFTTLLKNIEGDTPEESKELKELSFEIVTELKEQHFGGKTALYV ELENDNYHTANFIGLTVHSSQGTYFFTKETAESSEAFRKWVESDQTKVVYDAKKTIVAMNRIGLAISGITFDIMLASYLL NPSDSIDDFTSVAVRHDYTEVETDEAVYGKGAKRSTPEESIVAAHLARKAVAIADLEKRLVDDLEKNEQLALMEDLELPL TFVLAEMEMQGVSVDTDRLEDMKVELGGRLKTLEASIHSLAGEEFNINSPKQLGVILFEKLELPPVKKTKTGYSTAADVL ESLSGKHAIIDEILLYRQLGKIQSTYIEGLLKVTDKETHKVHTRFNQTLTQTGRLSSVDPNLQNIPIRLEEGRKIRQVFV PSKPGWKMFSADYSQVELRVLAHISEDENLIYAFKHDYDIHTKTAMDVFHVEKEEVDSLMRRQAKAVNFGIVYGISDYGL SQNLGITRKEAKDFIDRYFVSYPAVKEYMQDIVRFAKEKGYVETILHRRRYIPEIVSRNFNVRGFAERTAMNTPIQGSAA DIIKKAMILMSERLVSEKLEAKLLLQVHDELIFEAPEAEIAKLEEIVPDVMENAVELSVPLKVDSAFGDTWYDAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 0.0 | 50 |
