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Name : lmo1300 (lmo1300) Accession : NP_464825.1 Strain : Listeria monocytogenes EGD-e Genome accession: NC_003210 Putative virulence/resistance : Resistance Product : hypothetical protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1055 EC number : - Position : 1328357 - 1329652 bp Length : 1296 bp Strand : + Note : similar to arsenic efflux pump protein DNA sequence : ATGCAGATTACTTTAGCTATTTTAGTTTTTGTCCTAACGCTGTTTTTCGTAATTTGGCAGCCAAGAAAATTATCGATTGG ATGGTCAGCTTGTGGCGGAGCGTTAATCGCATTATTACTTGGTGTTGTCACCTTAGCTGATGTTATGACAGTTACAGGGA TTGTATGGAATGCGACACTTGCTTTTATTGCGATTATAATCATTTCACTCATTTTAGATGAAATTGGATTTTTTGAGTGG GCGGCCCTACATATGGCACGTTTAGCAAGAGGGAATGGATTATTAATGTTTATTCTTATTTCTATTTTGGGTGCTCTTGT CGCGGCACTGTTTGCTAATGACGGAGCGGCATTGATTCTGACGCCAATTGTTTTAGCAATGGTGCGAGCGCTGGATTTTG ATGAGAAAAAGGTGTTTCCATTTATTATAGCTAGTGGATTTATAGCGGATACAACATCCTTGCCACTTGTAGTTAGTAAT TTAGTTAATATTGTTTCAGCTGATTTTTTTGGCATTAGTTTTTCACGGTATGCACTCATTATGTGGATCCCTACTATTTT TTCATTAGTTGCAAGTATTATCATTTTATATATCTATTTCCGAAAAGCTTTACCGAGAAAATACGATGTAAATGCGATTC AAAAGCCAGCTTCAGCACTTAAAGATAGGAAGATGTTTCATATTTCTTGGGGAATCCTTACTATTCTTGTAGTAGGCTAT TTTTTAAGTAGTTTTTTAGATATACCAGTGTCGTTTATTGCTTTACTAGTCGCTCTAATTTTCTTGTTAGTTGGTGCAAA AAGCCACTCTGTTTCAACAAAAGCTATTCTAAAAGGAGCACCTTGGAGCATTGTTTTTTTCTCAGTTGGTATGTATGTGG TTGTGTATGGCTTGCAAAATGTTGGAATCACCAAACTATTATCAGAAGCTATTACCTATGTCGCGCACTTTGGTTTATTT GCCGGAACAATCGGAATGGGTTTCATTGCTGCGATACTATCGTCTGTCATGAATAATTTGCCTACCGTGATGATAAATGC GCTAGCAATCGATCATACTTCATTTACCGGAGTAATGAAAGAGGCGCTAGTATATGCAAATGTTATTGGTTCGGATCTAG GACCTAAAATAACACCCATTGGCTCGCTCGCAACTTTACTTTGGTTACATGTGTTAGCTCAGAAAGGCATAAAGATAAGT TGGGCGTCATACTTCAAAATTGGTATTGTCATTACTATTCCTGTTTTGTTCATTACGCTCGTAGGCTTATACGTATCATT ACTTATTTGGAACTAA Protein sequence : MQITLAILVFVLTLFFVIWQPRKLSIGWSACGGALIALLLGVVTLADVMTVTGIVWNATLAFIAIIIISLILDEIGFFEW AALHMARLARGNGLLMFILISILGALVAALFANDGAALILTPIVLAMVRALDFDEKKVFPFIIASGFIADTTSLPLVVSN LVNIVSADFFGISFSRYALIMWIPTIFSLVASIIILYIYFRKALPRKYDVNAIQKPASALKDRKMFHISWGILTILVVGY FLSSFLDIPVSFIALLVALIFLLVGAKSHSVSTKAILKGAPWSIVFFSVGMYVVVYGLQNVGITKLLSEAITYVAHFGLF AGTIGMGFIAAILSSVMNNLPTVMINALAIDHTSFTGVMKEALVYANVIGSDLGPKITPIGSLATLLWLHVLAQKGIKIS WASYFKIGIVITIPVLFITLVGLYVSLLIWN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 4e-122 | 67 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 2e-116 | 65 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 5e-116 | 64 |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 4e-95 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lmo1300 | NP_464825.1 | hypothetical protein | BAC0574 | Protein | 1e-118 | 65 |
| lmo1300 | NP_464825.1 | hypothetical protein | BAC0575 | Protein | 6e-118 | 65 |
| lmo1300 | NP_464825.1 | hypothetical protein | BAC0578 | Protein | 6e-95 | 58 |
| lmo1300 | NP_464825.1 | hypothetical protein | BAC0577 | Protein | 2e-96 | 58 |
| lmo1300 | NP_464825.1 | hypothetical protein | BAC0576 | Protein | 5e-95 | 58 |
| lmo1300 | NP_464825.1 | hypothetical protein | BAC0031 | Protein | 2e-92 | 57 |
