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Name : lmo1106 (lmo1106) Accession : NP_464631.1 Strain : Listeria monocytogenes EGD-e Genome accession: NC_003210 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3451 EC number : - Position : 1142099 - 1144549 bp Length : 2451 bp Strand : - Note : highly similar to TN916 ORF16 DNA sequence : ATGGCATATCCAATTAAATATATTGAAAATAATCTGGTCTTTAACAATGATGGCGAATGTTTCGCTTATTATGAACTGAT ACCTTACAATTACAGCTTTCTAAGTCCAGATGAAAAGTATCAAGTGCATGATAACTTCCGCCAGCTTGTAGCTCAAAGCC GTGATGGAAAGATTCATGCGTTACAGCTTGCGACAGAATCCAGTATTAGAGCGACACAGGAACGCTCAAAGCTGGAAGTG AAAGGACGACTAAAAGAAGTCGCTCACAGAAAAATTGATGAACAAACCGAAGCGTTAGTTTCTATGATTGGCGACAATCA AGTAGACTATCGCTTTTTTATTGGATTCAAGTTACTGCTGAATGAACAAGAACTTTCCATTCAATCGGTTAGTCAAGAAA TCAAGAAAGCTGTGCAGGAATTTCTAAATGGTGTGAACCATAAGCTCATGGGCGACTTTGTGTCTATGAGTAATGCAGAG ATTGACCGATTCTCAAAAATGGAAAATCTATTGGAAAGTAAAATCTCCAGACGGTTCAAAATCCGTAAGCTAGATAAAAA TGATTTTGGTTATATCATTGAACATATCTACGGACAAACTGGTACACCTTACGAAGAATACGAATATCATTTACCTAAGA AATACCAGGATAAAGAAGTTCTAGTAAAGAAATATGATATCCTCAAACCTACTCGTTGTCTAATTGATGAAAGCCAGCGT TACTTAAAAATCATTCATGAAGATGAAACCACTTATGTTGCCTACTTCACGATTAACTCAATTGTAGGCGAACTTGATTT TCCTAGTTCTGAAATCTTCTATTATCAACAGCAACAATTTACCTTTCCTATTGATACCAGCATGAATGTAGAAATTGTAG CCAACAAAAAAGCTCTTACAACCGTGAGAAACAAAAAGAAAGAATTAAAAGATTTAGATTCTCATGCTTGGGAAAGCGAC AACGAAACAAGCAATAATGTAATTGACGCTTTGGATTCCGTGAATGAATTAGAAACGACACTCGACCAAAGTAAAGAATC CATGTATAAACTTAGCTATGTTGTTCGTGTATCTGCAAAGGATCTCGACGAGTTGAAAAGGCGTTGTGATGAAGTCAAAG ACTTTTACGACGACTTATCAATCAAACTCGTGCGTCCCTTTGGAGATATGTTAGGGCTACATGGCGAATTTATCCCTGCC AGTAAACGGTACATCAATGACTATATTCAATACGTCACATCAGATTTTTTGGCTGGACTTGGTTTTGGAGCGACACAAAC CCTTGGCGAACATGAGGGTATTTATGTTGGGTACAATCTGGACACTGGAAAGAATGTCTATCTGAAACCTGCCCTTGCTA GTCAAGGTGTCAAAGGTTCAGTTACCAATGCGTTAGCCAGTGCATTTATTGGTTCATTGGGTGGTGGTAAATCATTCAGT AACAATATGCTTGTTTATTATGCGGTACTATTTGGTGGACAAGCGGTTATCGTTGACCCTAAAGCAGAACGTGGCAAATG GAAAGAAACACTACCAGAAATCGCCCACGAGATAAACATTGTCAACTTAACGAGTGATGATGAAAACAAAGGACTGCTTG ACCCTTATGTCATTTTGAGCCGTAAAAAGGATTCTGAAAGTTTAGCTATTGATATTCTAACGTTCCTTACTGGTATCTCC AGTCGTGACAGTGATAAGTTTCCAGTGCTTAGAAAAGCGATTCGTAATGTAACCCAAAGTGAACAGCGAGGGTTATTACT TGTTATTGATGAATTACGAAAAGAAGATACTTCTATCAGTAACAGCATAGCCGACCATATCGAAAGTTTTGTTGACTATG ATTTTGCACACTTACTTTTTAGTGATGGAAATGTAACACAGTCTATCAGCTTAGAAAAACAGCTGAACATTATTCAAGTT GCTGACCTCGTATTGCCAGACGCTGACACTAGCTTTGAAGAATACACTACTATGGAATTATTGAGTGTTGCCATGCTGAT TGTCATTAGTACCTTTGCATTAGACTTTATCCACACAGACCGCTCTATCTTTAAGATAGTTGACCTTGACGAAGCATGGT CTTTCTTACAGGTGGCACAAGGTAAGACGTTATCTATGAAACTAGTTAGAGCTGGGCGTGCCATGAACGCTGGTGTTTAC TTTGTTACGCAAAATGCAGATGACCTTTTAGACGAAAAAATGAAGAACAATATCGGTCTAAAGTTTGCGTTTCGTTCCAC TGACCTTGTGGAAATCAAAAAGACCCTGACATTCTTTGGAGTTGACCCAGAAGATGAAAACAATCAGAAACGACTACGAG AATTGGAAAACGGACAGTGTTTAATCTCTGACCTTTACGGTCGTGTGGGAGTAATGCAATTCCACCCTATTTTTGAAGAA CTCTTACAAGCCTTTGATACTCGCCCACCTATTAGAAATGAGGTGGAATAA Protein sequence : MAYPIKYIENNLVFNNDGECFAYYELIPYNYSFLSPDEKYQVHDNFRQLVAQSRDGKIHALQLATESSIRATQERSKLEV KGRLKEVAHRKIDEQTEALVSMIGDNQVDYRFFIGFKLLLNEQELSIQSVSQEIKKAVQEFLNGVNHKLMGDFVSMSNAE IDRFSKMENLLESKISRRFKIRKLDKNDFGYIIEHIYGQTGTPYEEYEYHLPKKYQDKEVLVKKYDILKPTRCLIDESQR YLKIIHEDETTYVAYFTINSIVGELDFPSSEIFYYQQQQFTFPIDTSMNVEIVANKKALTTVRNKKKELKDLDSHAWESD NETSNNVIDALDSVNELETTLDQSKESMYKLSYVVRVSAKDLDELKRRCDEVKDFYDDLSIKLVRPFGDMLGLHGEFIPA SKRYINDYIQYVTSDFLAGLGFGATQTLGEHEGIYVGYNLDTGKNVYLKPALASQGVKGSVTNALASAFIGSLGGGKSFS NNMLVYYAVLFGGQAVIVDPKAERGKWKETLPEIAHEINIVNLTSDDENKGLLDPYVILSRKKDSESLAIDILTFLTGIS SRDSDKFPVLRKAIRNVTQSEQRGLLLVIDELRKEDTSISNSIADHIESFVDYDFAHLLFSDGNVTQSISLEKQLNIIQV ADLVLPDADTSFEEYTTMELLSVAMLIVISTFALDFIHTDRSIFKIVDLDEAWSFLQVAQGKTLSMKLVRAGRAMNAGVY FVTQNADDLLDEKMKNNIGLKFAFRSTDLVEIKKTLTFFGVDPEDENNQKRLRELENGQCLISDLYGRVGVMQFHPIFEE LLQAFDTRPPIRNEVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU05_0926 | YP_001198292.1 | hypothetical protein | Not tested | 89K | Protein | 0.0 | 84 |
| SSU98_0932 | YP_001200490.1 | hypothetical protein | Not tested | 89K | Protein | 0.0 | 84 |
