Gene Information

Name : cadA (lmo1100)
Accession : NP_464625.1
Strain : Listeria monocytogenes EGD-e
Genome accession: NC_003210
Putative virulence/resistance : Resistance
Product : cadmium resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 1134472 - 1136595 bp
Length : 2124 bp
Strand : -
Note : -

DNA sequence :
ATGAGTAAAGCGAGTAAACAAACAACATACCGTGTAGACGGTATGTCTTGTACGAATTGTGCAGGAAAGTTTGAAAAAAA
TGTTAAAAACCTTGAGGGTGTAACTGATGCAAAGGTTAATTTTGGAGCAGGAAAGATTTCAGTTTATGGAGAAACTTCCA
TCAGTCAAATTGAAAAAGCAGGAGCATTTGAAAATCTAAGAGTCACTGATGAAAAAGATTATTCAAGTAAACCTGCTAAG
AAAGAATCCTTTCTTAAGAAAAATTGGCATTTAGTTGTCTCAATTATTTTTATTATACTAGCCTTTATTTCTCAGAATAT
TAGTGGTGAAGATTCAACGACAACTATCATCTTGTATGTTATTGCAATTGTGGTTGGTGGATTTAATTTATTTAAAGAGG
GATTCGCTAATTTAATTAAATTAGACTTTACAATGGAATCACTTATGACTATAGCAATTATCGGTGCGTCCATCATAGGT
GAATGGGCTGAGGGTTCTATTGTAGTAATACTTTTTGCTTTTAGTGAAGTGTTAGAACGATATTCTATGGATAAAGCAAG
ACAATCTATTCGTTCATTAATGGACATCGCTCCAAAAGAGGCGTTAATACGTCGTGATGATGTTGAACAAATGATTGCAG
TTAGTGATATTCAAATTGGAGATATCATGATTATAAAACCCGGGCAAAAGATTGCCATGGATGGAGTTGTTATAAAAGGT
TATTCAGCAATTAATCAGTCCGCAATCACTGGAGAATCTATTCCAGTTGAAAAGAAAGTTGATGATGAAGTTTTTGCTGG
GACATTAAACGAAGAAGGACTATTAGAAGTAAAGGTTACGAAACATGTAGAAGATACTACAATTTCAAAGATTATACATT
TAGTTGAAGAAGCACAAGGTGAACGAGCACCAGCACAAGCGTTTGTAGATAAGTTTGCGAAGTATTATACACCTACTATT
ATGCTTATTGCTTTGCTTGTTGTAGTCGTTCCACCACTATTCTTTGGTGGTGATTGGGACACATGGGTATATCAAGGGTT
ATCTCTTCTAGTTGTAGGTTGTCCTTGTTCATTAGTAATTTCCACTCCAGTATCTATCGTTTCTGCAATTGGTAATTCAG
CAAAAAACGGTGTTCTTGTAAAAGGTGGAATTTACTTAGAAGAAATTGGTGGACTACAAGCAATTGCTTTTGATAAGACA
GGTACATTGACGAAAGGAAAACCAGTTGTAACTGATTTTATTCCTTATTCTGAACATATGGACGAACAGAATTCACTTTC
TATTATTACTGCTTTGGAAACCATGTCACAACACCCTCTTGCCTCAGCAATCATTTCAAAAGCTATGATTGATAATGTCG
ATTACAAATCAATAGAAATTGATAATTTTTCATCAATCACTGGTAAAGGTGTTAAAGGTGAGGTAAACGGTATAACCTAT
TACATTGGTAGCTCAAAACTTTTTGAATCTAGTTTAGAAAAATCTCAAAGTATATCTCAAACTTACCAATCATTACAAAA
ACAAGGAAAAACAGCTATGCTGTTTGGAACAGAATCAAATATTTTAGCAATCATAGCTGTGGCTGATGAAGTTAGGGAAT
CTAGTAAAGAAGTTATTGCACAACTTCATAAATTAGGGATTGCTCACACTATTATGTTAACAGGAGATAATAATGACACA
GCACAGTTTATAGGTAAGGAAATCGGCGTTTCTGATATAAAAGCAGAATTAATGCCAGAAGATAAACTTACTTACATCAA
AGAATTGAAACAAACATACGGCAAAGTCGCTATGATTGGAGATGGAGTAAATGATGCCCCTGCCTTAGCTGCTTCAACTG
TAGGAATAGCAATGGGAGGAGCTGGGACTGATACTGCTTTAGAAACAGCTGATGTTGCCTTAATGGGAGATGACTTAAAG
AAATTACCATTCATTGTAAATCTTAGTCGAAAAACATTAAAAATAATCAAGCAAAATATAACTTTCTCCCTTGGAATTAA
ATTACTAGCATTACTATTAGTGCTTCCAGGCTGGTTAACATTATGGATTGCGATTGTAGCTGATATGGGTGCCACATTAC
TAGTTACATTAAATGGATTAAGATTAATGAAAGTGAAAAAATAA

Protein sequence :
MSKASKQTTYRVDGMSCTNCAGKFEKNVKNLEGVTDAKVNFGAGKISVYGETSISQIEKAGAFENLRVTDEKDYSSKPAK
KESFLKKNWHLVVSIIFIILAFISQNISGEDSTTTIILYVIAIVVGGFNLFKEGFANLIKLDFTMESLMTIAIIGASIIG
EWAEGSIVVILFAFSEVLERYSMDKARQSIRSLMDIAPKEALIRRDDVEQMIAVSDIQIGDIMIIKPGQKIAMDGVVIKG
YSAINQSAITGESIPVEKKVDDEVFAGTLNEEGLLEVKVTKHVEDTTISKIIHLVEEAQGERAPAQAFVDKFAKYYTPTI
MLIALLVVVVPPLFFGGDWDTWVYQGLSLLVVGCPCSLVISTPVSIVSAIGNSAKNGVLVKGGIYLEEIGGLQAIAFDKT
GTLTKGKPVVTDFIPYSEHMDEQNSLSIITALETMSQHPLASAIISKAMIDNVDYKSIEIDNFSSITGKGVKGEVNGITY
YIGSSKLFESSLEKSQSISQTYQSLQKQGKTAMLFGTESNILAIIAVADEVRESSKEVIAQLHKLGIAHTIMLTGDNNDT
AQFIGKEIGVSDIKAELMPEDKLTYIKELKQTYGKVAMIGDGVNDAPALAASTVGIAMGGAGTDTALETADVALMGDDLK
KLPFIVNLSRKTLKIIKQNITFSLGIKLLALLLVLPGWLTLWIAIVADMGATLLVTLNGLRLMKVKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 0.0 68
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 0.0 68
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 0.0 68

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadA NP_464625.1 cadmium resistance protein BAC0298 Protein 1e-122 46