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Name : STY0887 Accession : NP_455382.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Unknown Product : hypothetical ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 880435 - 882306 bp Length : 1872 bp Strand : + Note : Fasta hit to YEJF_ECOLI (529 aa), 48% identity in 558 aa overlap; Orthologue of E. coli YLIA_ECOLI; Fasta hit to YLIA_ECOLI (612 aa), 84% identity in 611 aa overlap DNA sequence : GTGCCGCACAGCGATGAACTGGATAGCCGCGATGTTCTGTCCGTCAGTGGCCTGAATATCGCGTTTCACCACGAAGGGCA ACAGGTAGACGCCGTGCGTAATGTGTCATTACGCCTGAAGCGTGGAGAGACTCTGACGATTGTCGGCGAGTCGGGCTCGG GAAAATCGGTGACGGCGCTGGCGTTAATGCGGCTGATTGAGCAGTCGGGCGCGAACGTGCGCTGCGGCGAAATGCTGTTG CGTCGGCGTAATCGCCAGGTGATTGAGCTGTCTGAGCAGAGTGACGCGCAGATGCGGCGTGTGCGCGGCGCGGATATCGC CATGATTTTCCAGGAGCCAATGACCTCGCTCAACCCGGTATTTACCGTTGGCGAGCAAATTGCCGAATCTATTCGTTTGC ATCAGGGGGCCAGCCACGAAGAGGCGCTGGCGGAAGCGAAACGTATGCTCGATCAGGTACGGATCCCGGAGTCGCAGGCG ATTTTATCGCGTTATCCGCATCAGCTTTCCGGCGGGATGCGCCAGCGAGTCATGATTGCGATGGCGCTATCCTGCCGTCC GGCGGTATTGATTGCCGATGAACCCACCACGGCGCTGGATGTCACTATCCAGGCGCAAATTCTGCAACTTATCAAAGTGT TGCAGCAAGAGATGTCGATGGGCGTGATTTTTATCACTCACGACATGGGCGTCGTGGCGGATATTGCCGATCGCGTGCTG GTGATGTATCAGGGCGAGGCCGTGGAAACCGGCAGCGTAGAGCAGATTTTCCATGCGCCGACGCATCCTTATACCCAAAC GTTACTGGCCGCCGTCCCTCAGCTTGGCGCGATGCGAGGCCACTCGCTGCCACGCCGTTTCCCGTTGATTTCCGCTGACG AACCGGCCCTTTATGAATCGCAGATTGAGCAAGACACGGTGGTGGAAGGCGAACCTATTCTCCAGGTTCGGGGGCTGGTG ACGCGATTCCCGCTGCGTAGCGGTCTCTTTAACCGCGTTACGCGTGAAGTTCATGCCGTTGAGAATATCAGTTTCGATCT CTGGCCCGGCGAAACGCTATCGCTGGTGGGCGAGTCCGGTAGCGGAAAATCGACGACCGGACGCGCGCTGCTGCGGTTGG TTGAATCCCGGCAGGGGGAGATTATCTTTAACGGCCAGCGCATTGACACGCTGTCTGCGGGTAAACTCCAGCCGTTGCGC CGCGATATTCAGTGTATTTTCCAGGACCCTTACGCCTCGCTCGACCCGCGCCAGACCGTGGGGTATTCCATTATGGAACC TTTACGGATTCATGGTCTGGGGCAGGGGGACGCTGCGGCAAAGCGCGTGGCCTGGTTGCTTGAGCGTGTCGGATTACGTC CTGAACATGCCTGGCGTTATCCGCACGAGTTTTCCGGCGGTCAACGTCAGCGCATCTGCATTGCTCGCGCGCTGGCATTG AATCCTAAAGTGATTATTGCTGATGAGGCGGTCTCCGCGCTGGATGTTTCCGTTCGCGGACAGATCATTAATTTACTGCT CGATTTACAACGGGAAATGGGGATCGCCTACCTGTTTATTTCGCATGATATGGCGGTCGTGGAGCGAATTAGCCATCGCG TGGCGGTGATGTATCTTGGTCAAATTGTTGAGATGGGGCCGCGGCGCGCCGTTTTTGAAAATCCGCAGCATCCTTATACG CGTAAATTGATGGCGGCGGTGCCGGTTGCCGATCCCTCCAGACACCGGCCGCGGCGCGTTCTGCTATCAGATGATATACC CAGCAATATTCATAAACGTGGCGAAGAGACGCCCGCCGTTTCATTACAGTTGGTCGGGCCGGGACATTATGTTGCGCGGC CGCTGCAGGATAATGCGCTCTCGCGCTTATAA Protein sequence : MPHSDELDSRDVLSVSGLNIAFHHEGQQVDAVRNVSLRLKRGETLTIVGESGSGKSVTALALMRLIEQSGANVRCGEMLL RRRNRQVIELSEQSDAQMRRVRGADIAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASHEEALAEAKRMLDQVRIPESQA ILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQQEMSMGVIFITHDMGVVADIADRVL VMYQGEAVETGSVEQIFHAPTHPYTQTLLAAVPQLGAMRGHSLPRRFPLISADEPALYESQIEQDTVVEGEPILQVRGLV TRFPLRSGLFNRVTREVHAVENISFDLWPGETLSLVGESGSGKSTTGRALLRLVESRQGEIIFNGQRIDTLSAGKLQPLR RDIQCIFQDPYASLDPRQTVGYSIMEPLRIHGLGQGDAAAKRVAWLLERVGLRPEHAWRYPHEFSGGQRQRICIARALAL NPKVIIADEAVSALDVSVRGQIINLLLDLQREMGIAYLFISHDMAVVERISHRVAVMYLGQIVEMGPRRAVFENPQHPYT RKLMAAVPVADPSRHRPRRVLLSDDIPSNIHKRGEETPAVSLQLVGPGHYVARPLQDNALSRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 3e-99 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 4e-73 | 41 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-73 | 41 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-73 | 41 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-73 | 41 |
