Gene Information

Name : STY0648
Accession : NP_455180.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Virulence
Product : conserved hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG1475
EC number : -
Position : 650170 - 650787 bp
Length : 618 bp
Strand : -
Note : Orthologue of E. coli YBDM_ECOLI; Fasta hit to YBDM_ECOLI (209 aa), 77% identity in 205 aa overlap

DNA sequence :
ATGCAACACCGACTCACAACCGAAATAACTCACTTTCTCTCTGGACTGCCTGAAGAGGAAAGGATCGCCGCCATTAATGA
ATTTAGAAGGGCGATACATAACGTTAGTCCTTTTCGCGATGAGCCAGTCGATTGTGTCCTGTGGGTGAAAAACGATCATA
TTTCGCCTAATGACTACAACCCGAATAACGTTGCGCCACCGGAGAAAAAATTGCTGCTTAAATCGATTGAAAAAGATGGC
TTTACTCAGCCGATTGTGGTGGTAAAGGCCAATACGGAGGAATACGAGATTGTAGACGGCTTTCACCGTCATGAGTTGGG
CAAAGGAAAAGCGGTCCTGAAAAGGCGCCTGAAAGGTTATCTGCCGGTAGCGTGTCTGGACAGAGAACGTCACGAACGGA
TGGCGGCAACCATCCGGCATAACCGCGCGCGCGGACGCCACCAGATCCACGCCATGTCCGAAATCGTACGCGAACTTTCT
CAGCTAGGCTGGGACGAGAGCAAAATCGGACAGGAGTTAGGTATGGACGCCGATGAAGTCCTGCGCCTGAAACAGATCAA
CGGACTGCAGGAACTCTTTGCAGACCGTCGATTCTCCAGAGCGTGGACGGTTAAATAA

Protein sequence :
MQHRLTTEITHFLSGLPEEERIAAINEFRRAIHNVSPFRDEPVDCVLWVKNDHISPNDYNPNNVAPPEKKLLLKSIEKDG
FTQPIVVVKANTEEYEIVDGFHRHELGKGKAVLKRRLKGYLPVACLDRERHERMAATIRHNRARGRHQIHAMSEIVRELS
QLGWDESKIGQELGMDADEVLRLKQINGLQELFADRRFSRAWTVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 5e-56 62
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 5e-56 62
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 3e-56 61
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 3e-56 60
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 3e-56 60
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 7e-44 59
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-43 59
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-43 59
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 4e-54 57
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 4e-54 56
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 2e-32 53
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 3e-32 53
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 3e-31 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STY0648 NP_455180.1 conserved hypothetical protein VFG1505 Protein 1e-56 61