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Name : int Accession : NP_458757.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Unknown Product : integrase (fragment) Function : - COG functional category : - COG ID : - EC number : - Position : 4539799 - 4540077 bp Length : 279 bp Strand : - Note : Protein sequence is in conflict with the conceptual translation; Gene remnant with strong similarities to the C-termini of several integrases e.g. Escherichia coli integrase Int TR:Q9RM38 (EMBL:AJ245585) (304 aa) fasta scores: E(): 3.1e-20, 75.4% id in 65 DNA sequence : AGATCGGGTGGTTACGACACCAAAACCGAAGTCTGTGGTCATGGCTTCCGCACAATGGCCTGTAGCGCCCTGAACGAGTC TGCGCTGTGGTCTAAGGACGCCATCGAGCGCCAGATGAGCCACAAGGAGCGCAACGGCGTGCGTGCGGCATATGTACATA AAGCGGAGCATCTGGAAGCGCGTATGGAGATGATGCAGTGGTGGTCGGATTATCTCGACATGAGCCGCGAGGGGTACGTT GCGCCCTATATTTATGCGCAGCGGCATAAGGCGGCCTGA Protein sequence : RSGGYDTKTEVCGHGFRTMACSALNESALWSKDAIERQMSHKERNGVRAAYVHKAEHLEARMEMMQWWSDYLDMSREGYV APYIYAQRHKAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | NP_458757.1 | integrase (fragment) | Not tested | SPI-7 | Protein | 2e-38 | 100 |
