Gene Information

Name : tviC
Accession : NP_458739.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Virulence
Product : Vi polysaccharide biosynthesis protein, epimerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 4521569 - 4522615 bp
Length : 1047 bp
Strand : -
Note : Similar to Salmonella typhi Vi polysaccharide biosynthesis protein VipB or TviC SW:VIPB_SALTI (Q04973) (348 aa) fasta scores: E(): 0, 100.0% id in 348 aa, and to Pseudomonas aeruginosa WbpP TR:Q9RHD6 (EMBL:AF035937) (341 aa) fasta scores: E(): 0, 66.6% id

DNA sequence : 
ATGACGGCTTACGAAGAACTACGGACCAAACTGGTTCTGGCACCAAAGCGCTGGCTGATCACTGGCGTAGCAGGCTTTAT
TGGCTCCGGCTTATTAGAAGAATTACTCTTTCTCAACCAGACTGTCATTGGACTGGATAACTTTTCCACCGGTTATCAGC
ATAATCTAGACGACGTTCGCACGTCCGTCAGTGAGGAGCAATGGTCGCGATTTATTTTTATTCAGGGTGACATCAGGAAA
TTTACTGACTGTCAGAAAGCGTGTAAGAACGTTGACTATGTTCTCCACCAAGCCGCGCTAGGAAGCGTGCCACGTTCCCT
AAAGGATCCCATCGCGACTAATAGCGCCAATATTGATGGTTTTTTAAATATGTTGACGGCGGCGAGAGATGCTCATGTCT
CTAGTTTCACCTACGCCGCAAGCAGTAGCACCTATGGAGACCATCCCGATTTACCTAAAATTGAGGAACGGATCGGTCGA
CCACTCAGCCCGTATGCGGTAACAAAATACGTCAATGAATTGTACGCTGATGTGTTTGCACGTAGCTATGAATTTAACGC
TATTGGCCTACGCTACTTTAATGTCTTTGGTCGCCGCCAAAATCCTAACGGAGCGTACTCGGCAGTTATTCCTCGCTGGA
TACTATCGCTTCTTAAAGATGAACCAATTTATATCAATGGCGATGGCTCAACAAGCAGGGATTTTTGCTATATAGAGAAT
GTGATTCAGGCCAATCTATTATCAGCAACAACTAATGATTTAGCCTCTAAAAATAAGGTCTATAATGTGGCAGTTGGAGA
TAGAACTTCGTTAAATGAGCTTTATTATCTAATTCGCGATGGGCTTAATTTATGGCGGAACGAACAAAGTAGAGCTGAAC
CAATTTATAAAGATTTTCGTGACGGTGACGTTAAGCATAGCCAGGCAGATATTACCAAAATAAAAACATTTCTTTCATAT
GAGCCTGAATTTGATATCAAAGAAGGACTTAAGCAGACTCTAAAATGGTATATCGATAAACATTCTACTTTGTATTCCTC
GGTATAA

Protein sequence : 
MTAYEELRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRK
FTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGR
PLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIEN
VIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFLSY
EPEFDIKEGLKQTLKWYIDKHSTLYSSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 6e-154 100
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 6e-154 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase VFG0430 Protein 3e-154 100