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Name : tviD Accession : NP_458738.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Virulence Product : Vi polysaccharide biosynthesis protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG4235 EC number : - Position : 4519050 - 4521545 bp Length : 2496 bp Strand : - Note : Similar to Salmonella typhi Vi polysaccharide biosynthesis protein TviD SW:TVID_SALTI (Q04974) (831 aa) fasta scores: E(): 0, 99.9% id in 831 aa DNA sequence : ATGAATTTAATGAAATCGTCAGGGATGTTTACGCTTACAGCCATTGGCAGTTGCCGTATTGTGAGTCCGGTAAAACGAGC TCAGCCTTATTTTAATTTTCAGGCAAACTTTAAGAGAATATATGGTTTTACGCATACGAGCAGCGAGGCATTACAGCAGA TTCGGTTTATTTTGGGCTTGATAGACATTCCTGAAAAGGTCCGACCATTTATTTTTAGACCTAATGTAAACTATTCAAAC ACCGACGTACATAGTCGTTCTGATTTCTATATCATTGAGATTTCAAGTCAGAAGAAGATTATGGCCTATGGGTTCTGCTT ACAAATAAATTATTTAACTCGTCATTTCTATGAATTTTTTAGCCAAACAGAGCGGGCGTGCATGTACTGGTCGTTGGCCA CGCAAGGAAATCGACACAAACTGCTGGCCTATCTCAAAGACGATCCCTGTTTTGCCGGAATGTCGGAAGACGATCGTGCC TTATTAAGCAATATCAATGTCGAGCAGATGGATGAGCATGCTATCGAACAGGATATGATGGAAATCGTTCAGCTTCTTGG TCGCGATCGCGTTATGTTTATGACACATGTTGATGCCGTGACTCGTGCTGGAACCGTCATTCTATCCCGTAGTCGGTTGA TTAAAAATGTCGACACCATCGCCGCCAGGATGGATATTCCCTGCGTTAACCCGACAAATTTGATGGAAAAGTGGGGGCAG AAACGAGCCCTGGAAAAAAATGGCGACGATCTTACTCATTATACCGATATGTTTGGTGACGCGATCGTTGCGGCTATTTT TAAGGGAGTGATCAATAATACTAATCATCATCTTGATGAGGGGCGACAAGAGAAACAGGACCAAATACGTGAGATTACCT TATCGATCACTAAGCAGCTTGCAGATGGCGACATTATTGCTGCATCACAACAACTTTTTGCCGCATTAAGAAATCAGCAG CAAGATCCCGTTCTAATCCAACTTCGGTCCGTAATCTTCAGCCATTTAGGTTATTATGAACAGGCTTATCAGGATATTAG TGATGTTGAGAAAATTATCGGTACGACTGACAGTACATTACGTTGTCGGCTGAGGTCTCTACATGGATTAGCGCGTTGGC GGGAAGCCTTATCGACGGCAGAGATGATGCTTTCCAATGAAATTGAAGATGAAGAAGTCCTTACCGTTGCCGCCGGCTCA GCCGATGCTTTACAGCTGTTTGATAAGTCATATCATTATTGGAAACGTGTACTATTATTGAATCCTGAAACTCAAAGCGG ATGGGTTAATTTCCTGAGCAGCACGCAATATTTCAATGATGGCAACGCATTCTCTGAAGCTTTCCATGCCGGCATTCAAT CGCAGCGCCTAAATGATACGTTTATGGAAACGGCGTTATCTTTGGCAATCAAATTCAGTGATGAATTGATTTTCATGCAT GCGCTCGAGCAGCTACTCCGCCATGAGTCAGAATTTGCGCTGACGGTATTGTCGACGATTCATGATACCGGTCTCGTTAT CCGCACAGCTTTCTGCATCAAGAATATGAGCTATCATCAAGCGCTTCGCACCTCGTATAAAGATAAAATCCACGACGTTT TTGAGGCATGGAACAATACCGCGCTGTCGCTACATTCGGTTGATGATTTTGTCTCACTGAGTACTTCGCTAGCCTATAGC TACTCTGCATTTATGGTTTATCCCCATTCACGTATTTCTCGCTTTAATAATGAAGTTAAAATGGCATGGCGCGATAAATT AAGAGAAATGTATGAGCGTGAGGATTATGAAAATATCCTGGCAGGGGCGAAAATAGTGTGGCCACTTCTGAAGTTTGATC CCGTTGGCACCGTATATTGTGCAAGAACGCTGGTGAATCTTGGTGCCTGGAAAGACGCGTGCACGTTGGCCCACATGACC TTGATTCGTAACTCGAACATTACCAGCCTGCAGTCGATTATGTTACGCAGCATACGTCATATTAACAACATTCCGTTCCT CATTGATTTGATTGCTAACGTCATGAGCATTACTCTATCATTCCAGAATGCCTCAATGAACAAGTTGTTTGAGAAAGAGT GTCGCAATGTTGCAACCAGAGCCCTTAAATATGTACGCCAGAAGAAAACTGAAGGGCGTCTGGATGAAGCATTGTCTGTA TTGATTAGCCTGAAACGAATTGAGCCTGATGTTTCTCGTCTGATGCGTGAATATAAGCAAATTATCAGATTATTTAATGA GTCACGGAAGGATGGCGGTAGCACTATCACGTCTTATGAACATCTAGACTATGCGAAAAAATTACTCGTTTTTGATAGCG AAAATGCCTATGCCTTGAAATATGCCGCATTAAATGCAATGCATTTACGCGACTACACGCAGGCTTTGCAGTATTGGCAG CGACTGGAGAAAGTGAATGGACCAACGGAGCCGGTGACAAGGCAGATCTCGACCTGCATAACCGCATTACAAAAAAATAC ATCAGGGAAGTCGTAA Protein sequence : MNLMKSSGMFTLTAIGSCRIVSPVKRAQPYFNFQANFKRIYGFTHTSSEALQQIRFILGLIDIPEKVRPFIFRPNVNYSN TDVHSRSDFYIIEISSQKKIMAYGFCLQINYLTRHFYEFFSQTERACMYWSLATQGNRHKLLAYLKDDPCFAGMSEDDRA LLSNINVEQMDEHAIEQDMMEIVQLLGRDRVMFMTHVDAVTRAGTVILSRSRLIKNVDTIAARMDIPCVNPTNLMEKWGQ KRALEKNGDDLTHYTDMFGDAIVAAIFKGVINNTNHHLDEGRQEKQDQIREITLSITKQLADGDIIAASQQLFAALRNQQ QDPVLIQLRSVIFSHLGYYEQAYQDISDVEKIIGTTDSTLRCRLRSLHGLARWREALSTAEMMLSNEIEDEEVLTVAAGS ADALQLFDKSYHYWKRVLLLNPETQSGWVNFLSSTQYFNDGNAFSEAFHAGIQSQRLNDTFMETALSLAIKFSDELIFMH ALEQLLRHESEFALTVLSTIHDTGLVIRTAFCIKNMSYHQALRTSYKDKIHDVFEAWNNTALSLHSVDDFVSLSTSLAYS YSAFMVYPHSRISRFNNEVKMAWRDKLREMYEREDYENILAGAKIVWPLLKFDPVGTVYCARTLVNLGAWKDACTLAHMT LIRNSNITSLQSIMLRSIRHINNIPFLIDLIANVMSITLSFQNASMNKLFEKECRNVATRALKYVRQKKTEGRLDEALSV LISLKRIEPDVSRLMREYKQIIRLFNESRKDGGSTITSYEHLDYAKKLLVFDSENAYALKYAALNAMHLRDYTQALQYWQ RLEKVNGPTEPVTRQISTCITALQKNTSGKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviD | NP_807943.1 | VI polysaccharide biosynthesis protein | Virulence | SPI-7 | Protein | 0.0 | 100 |
| tviD | NP_458738.1 | Vi polysaccharide biosynthesis protein | Virulence | SPI-7 | Protein | 0.0 | 100 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tviD | NP_458738.1 | Vi polysaccharide biosynthesis protein | VFG0429 | Protein | 0.0 | 100 |
