|
Name : STY4633 Accession : - Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Unknown Product : SOS operon tum protein (pseudogene) Function : - COG functional category : - COG ID : - EC number : - Position : 4499226 - 4499656 bp Length : 431 bp Strand : - Note : Similar to Bacteriophage 186 SOS operon tum protein SW:TUM_BP186 (P41063) (146 aa) fasta scores: E(): 5.4e-14, 29.7% id in 145 aa. Contains a frameshift after codon 53. There appears to be a deletion of three amino acids in comparison to the tum protein s DNA sequence : ATGCAGGACTATATTTTGGAGTCGTTGAAGCTCCAGCGCATTGATTTTTTTATTAAGCTTGTAGCGGCTAGTGAGTGCAG CGACGAAGAAAAGCGGCTGGCTATCCAGTGGGTGTCAGAACTGACCGACGAGCTGATGGCGAAAATCCGCAGCCATGAAC ACTGCCGGTCAATGGACGTAACCAGTTAAGGGAAATCTGTATGCGCATTGAAATAATGATCGATAAAGAGCAGAAGATTA GCCAGGCTACACTGGACGCCCTTGAATCCGAGCTTTACCGTAATTTGCGCCCTCTGTATCCCAAAACAGCAATTCGTATC CGCAAGGGCAGCGCCAATGGTGTTGAACTGAGCGGGTTAAAACTGGATGAAGACAAAAAGCGAGTGATGGAAATAATGCA GCAGGTCTGGGAGGACGACAGCTGGTTACAT Protein sequence : - |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4633 | - | SOS operon tum protein (pseudogene) | Not tested | SPI-7 | DNA | e-245 | 100 |
| t4327 | - | - | Not tested | SPI-7 | DNA | e-244 | 99.8 |
