Gene Information

Name : STY4626
Accession : NP_458708.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Unknown
Product : putative capsid protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4492225 - 4493058 bp
Length : 834 bp
Strand : -
Note : Similar to Bacteriophage P2 presumed capsid scaffolding protein O SW:VPO_BPP2 (P25478) (284 aa) fasta scores: E(): 0, 45.0% id in 280 aa

DNA sequence :
ATGACAGTGAAAGCAAAGCGTTTCCGCATCGGGGTGGAAGGTGCCACCACTGACGGGCGCGAGATCCAGCGTGAATGGCT
GGTACAGATGGCTGCCAGCTACAACCCGACGGTCTATACCGCGCTGATTAACCTTGAGCACATCAAGTCTTATCTGCCGG
AGAGCACTTTTAACCGCTATGGCAGGGTGACGGGGCTGGTTGCAGAAGAAATCCAGGACGGCCCGCTGGCGGGCAAGATG
GCACTTTATGCCGATATCGAACCCACTGACGCCCTGGTGGAACTGGTGAAAAAAGGCCAGAAGCTTTTCACCTCCATGGA
GGTCAGCACGAAGTTTGCCGACACCGGCAAAGCCTACCTTGTGGGGCTGGGTGCGACGGACGATCCTGCGAGCCTTGGCA
CCGAAATGCTGGCTTTCAGCGCCAGCGCCGCACATAACCCGCTGGCAAACCGTAAGCAGAACCCTGAAAACCTGTTTTCG
GAAGCGGTTGAAACGCTGATCGAACTGGAAGAAGCCCAGGACGAAAAGCCGTCCCTCTTTGCCAGCGTCACCGCGCTGTT
CACCAAAAAAGAGCAGACCGACGATGCGCGTTTCTCCGATGTGCATAAAGCCGTGGAACTTGTCGCCACCGAGCAGCAGA
ACCTGAGCGAGCGCACTGATAAATCCCTGGCTGAAAACGGTGAGCGCCTTTCCGCGCTGGAGTCCTCCCTGCAGGAACAG
CAGACCGCCTTTGCCGAGCTACAGCAGCAACTGAGCCGCGAAGACAGCCGCAAGGATTACCGCCAGCGCGCGCCGGGCGG
TGACGCACCGGCAGGCACCCTGACCAATTGCTGA

Protein sequence :
MTVKAKRFRIGVEGATTDGREIQREWLVQMAASYNPTVYTALINLEHIKSYLPESTFNRYGRVTGLVAEEIQDGPLAGKM
ALYADIEPTDALVELVKKGQKLFTSMEVSTKFADTGKAYLVGLGATDDPASLGTEMLAFSASAAHNPLANRKQNPENLFS
EAVETLIELEEAQDEKPSLFASVTALFTKKEQTDDARFSDVHKAVELVATEQQNLSERTDKSLAENGERLSALESSLQEQ
QTAFAELQQQLSREDSRKDYRQRAPGGDAPAGTLTNC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4626 NP_458708.1 putative capsid protein Not tested SPI-7 Protein 2e-125 100
t4320 NP_807915.1 capsid protein Not tested SPI-7 Protein 2e-125 100
unnamed ABR13465.1 putative capsid scaffold Not tested PAGI-6 Protein 2e-49 47